Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72108 | Canola | nucleus | 93.12 | 91.63 |
| Bra007276.1-P | Field mustard | nucleus | 98.79 | 86.52 |
| Bra007274.1-P | Field mustard | nucleus | 98.38 | 86.17 |
| CDY51261 | Canola | nucleus | 83.81 | 82.8 |
| CDX76014 | Canola | nucleus | 83.81 | 76.38 |
| AT3G56850.1 | Thale cress | nucleus | 90.69 | 75.42 |
| CDX67659 | Canola | nucleus | 78.54 | 74.9 |
| CDY47381 | Canola | nucleus | 87.45 | 74.48 |
| CDY53679 | Canola | nucleus | 71.26 | 64.23 |
| CDX79959 | Canola | nucleus | 70.45 | 61.7 |
| CDY06946 | Canola | nucleus | 66.8 | 59.78 |
| CDY57581 | Canola | nucleus | 63.56 | 57.72 |
| KRH64894 | Soybean | nucleus | 61.54 | 48.1 |
| KRG94991 | Soybean | nucleus | 61.94 | 47.81 |
| KRG94206 | Soybean | nucleus | 60.73 | 46.73 |
| KRH57716 | Soybean | nucleus | 58.3 | 44.17 |
| PGSC0003DMT400072260 | Potato | nucleus | 60.73 | 43.23 |
| PGSC0003DMT400018574 | Potato | nucleus | 55.06 | 42.63 |
| Solyc10g081350.1.1 | Tomato | nucleus | 60.32 | 42.57 |
| CDY28083 | Canola | nucleus | 35.22 | 36.71 |
| Solyc10g076920.1.1 | Tomato | nucleus | 39.27 | 34.28 |
| CDY65560 | Canola | nucleus | 40.49 | 33.11 |
| CDY51041 | Canola | nucleus | 42.91 | 32.12 |
| CDY17109 | Canola | nucleus | 41.3 | 30.45 |
| CDY68227 | Canola | nucleus | 40.49 | 28.65 |
| CDX92320 | Canola | nucleus | 40.89 | 28.45 |
| CDX69020 | Canola | nucleus | 40.08 | 28.29 |
| CDX99242 | Canola | nucleus | 40.49 | 28.25 |
| CDY18575 | Canola | nucleus | 39.68 | 27.84 |
| CDY63041 | Canola | nucleus | 39.68 | 27.68 |
| CDX82302 | Canola | nucleus | 39.27 | 26.65 |
| CDX84141 | Canola | nucleus | 42.11 | 26.4 |
| CDX75056 | Canola | nucleus | 42.51 | 26.32 |
| CDY08701 | Canola | nucleus | 36.44 | 26.01 |
| CDY10500 | Canola | nucleus | 36.44 | 26.01 |
| CDY43738 | Canola | nucleus | 42.51 | 25.99 |
| CDX72445 | Canola | nucleus | 42.11 | 25.37 |
| CDY58256 | Canola | nucleus | 40.08 | 25.32 |
| CDX71528 | Canola | nucleus | 36.03 | 22.76 |
| CDY54481 | Canola | nucleus | 26.32 | 22.73 |
| CDY22311 | Canola | nucleus, plastid | 24.29 | 22.56 |
| CDY18197 | Canola | nucleus, plastid | 24.29 | 22.3 |
| CDY22378 | Canola | nucleus | 35.63 | 22.28 |
| CDX89852 | Canola | nucleus, plastid | 23.89 | 22.01 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078GPN9 | UniProt:A0A078GPN9 | EnsemblPlants:CDY27189 | ProteinID:CDY27189 |
| ProteinID:CDY27189.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00037060001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EF00C6 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaA09g36130DBnaA09g36130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPN9]
Coordinates
chrLK032201:+:79639..81669
Molecular Weight (calculated)
27782.1 Da
IEP (calculated)
9.833
GRAVY (calculated)
-0.858
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSQREPRSH QSLNRQGSLY SLTLDEVQTH LGSSGKALGS MNLDELLKSV CSGSLTLPRD LSKKTVEEVW KDIQQDKNGG GSGHERRDKQ PTLGEMTLED
101: LLLKAGVVTE TVPGSNHGNG SAGMEQNITQ VAPWVQYHQL PSMPQPQSFM PYPVADMQAM VSQSSLMVVE KTVERKQKRM IKNRESAARS RARKQQAYTH
201: ELEIKVSRLE EENERLRRQK EVEKILPSAP PPLDPKRQLR RTSSAPF
101: LLLKAGVVTE TVPGSNHGNG SAGMEQNITQ VAPWVQYHQL PSMPQPQSFM PYPVADMQAM VSQSSLMVVE KTVERKQKRM IKNRESAARS RARKQQAYTH
201: ELEIKVSRLE EENERLRRQK EVEKILPSAP PPLDPKRQLR RTSSAPF
001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.