Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g076920.1.1 | Tomato | nucleus | 81.5 | 91.87 |
| PGSC0003DMT400072260 | Potato | nucleus | 69.28 | 63.69 |
| CDX72108 | Canola | nucleus | 45.77 | 58.17 |
| CDY51261 | Canola | nucleus | 44.2 | 56.4 |
| KRG94206 | Soybean | nucleus | 55.8 | 55.45 |
| KRH64894 | Soybean | nucleus | 54.86 | 55.38 |
| KRG94991 | Soybean | nucleus | 55.49 | 55.31 |
| CDY27189 | Canola | nucleus | 42.63 | 55.06 |
| PGSC0003DMT400058469 | Potato | nucleus | 25.08 | 54.79 |
| Bra014668.1-P | Field mustard | nucleus | 38.87 | 54.15 |
| Bra007276.1-P | Field mustard | nucleus | 47.34 | 53.55 |
| Bra007274.1-P | Field mustard | nucleus | 47.34 | 53.55 |
| AT2G41070.4 | Thale cress | nucleus | 45.45 | 53.51 |
| KRH57716 | Soybean | nucleus | 54.55 | 53.37 |
| AT3G56850.1 | Thale cress | nucleus | 48.59 | 52.19 |
| CDX76014 | Canola | nucleus | 44.2 | 52.03 |
| CDX67659 | Canola | nucleus | 41.69 | 51.35 |
| CDY57581 | Canola | nucleus | 43.57 | 51.1 |
| Bra016953.1-P | Field mustard | nucleus | 41.69 | 49.81 |
| CDY47381 | Canola | nucleus | 45.14 | 49.66 |
| CDY06946 | Canola | nucleus | 42.63 | 49.28 |
| CDY53679 | Canola | nucleus | 42.32 | 49.27 |
| Bra004597.1-P | Field mustard | nucleus | 42.95 | 48.75 |
| CDX79959 | Canola | nucleus | 42.95 | 48.58 |
| Bra003253.1-P | Field mustard | plastid | 44.51 | 35.24 |
| PGSC0003DMT400059040 | Potato | nucleus | 32.29 | 28.14 |
| PGSC0003DMT400020670 | Potato | nucleus | 38.87 | 27.37 |
| PGSC0003DMT400066603 | Potato | nucleus | 34.8 | 26.81 |
| PGSC0003DMT400006851 | Potato | nucleus | 34.8 | 25.93 |
| PGSC0003DMT400076576 | Potato | nucleus | 22.88 | 25.7 |
| PGSC0003DMT400015892 | Potato | nucleus | 32.6 | 25.12 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| UniProt:M1AAW1 | PFAM:PF00170 | EnsemblPlantsGene:PGSC0003DMG400007208 | PGSC:PGSC0003DMG400007208 | EnsemblPlants:PGSC0003DMT400018574 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000295FE60 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BZIP transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400007208]
Coordinates
chr10:-:59647894..59650942
Molecular Weight (calculated)
35691.2 Da
IEP (calculated)
6.729
GRAVY (calculated)
-0.767
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGGDEAK ANALATQGSL YSLTLDEVRN QLGNCGKPLN CMNLDEFVKT VWTIESNQEV VGGNDYGAVQ HGASQHRPSS ITMSRDLSKK TVDEVWQDIQ
101: QGVKTDNVDK RSQERQLTLG EITLEDFLVK AGVIAESTQG KRISGLVFGV DSMSLTQQAQ WPHYQIPAMQ QVPEQQHQQQ QQNIPPVFMP GHPIQQPLPV
201: VANPIMDATY PETQVTMSPA HIMGTLSDTQ TSGRKRVAPH DVAENSVERR QKRMIKNRES AARSRARKQA YTHELENKVS FLEEENEKLK RQKEMEDILP
301: SVPPPEPKYQ LRRTSSGPI
101: QGVKTDNVDK RSQERQLTLG EITLEDFLVK AGVIAESTQG KRISGLVFGV DSMSLTQQAQ WPHYQIPAMQ QVPEQQHQQQ QQNIPPVFMP GHPIQQPLPV
201: VANPIMDATY PETQVTMSPA HIMGTLSDTQ TSGRKRVAPH DVAENSVERR QKRMIKNRES AARSRARKQA YTHELENKVS FLEEENEKLK RQKEMEDILP
301: SVPPPEPKYQ LRRTSSGPI
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.