Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004597.1-P | Field mustard | nucleus | 99.65 | 100.0 |
| CDY53679 | Canola | nucleus | 91.84 | 94.53 |
| CDY06946 | Canola | nucleus | 77.31 | 78.99 |
| CDY57581 | Canola | nucleus | 75.89 | 78.68 |
| AT2G41070.4 | Thale cress | nucleus | 73.76 | 76.75 |
| CDX72108 | Canola | nucleus | 64.89 | 72.91 |
| CDY27189 | Canola | nucleus | 61.7 | 70.45 |
| CDY51261 | Canola | nucleus | 61.35 | 69.2 |
| CDX76014 | Canola | nucleus | 63.12 | 65.68 |
| CDX67659 | Canola | nucleus | 58.51 | 63.71 |
| CDY47381 | Canola | nucleus | 65.25 | 63.45 |
| KRG94991 | Soybean | nucleus | 51.77 | 45.62 |
| KRH64894 | Soybean | nucleus | 51.06 | 45.57 |
| KRG94206 | Soybean | nucleus | 51.42 | 45.17 |
| PGSC0003DMT400018574 | Potato | nucleus | 48.58 | 42.95 |
| KRH57716 | Soybean | nucleus | 49.29 | 42.64 |
| PGSC0003DMT400072260 | Potato | nucleus | 51.77 | 42.07 |
| Solyc10g081350.1.1 | Tomato | nucleus | 51.42 | 41.43 |
| CDY28083 | Canola | nucleus | 31.56 | 37.55 |
| Solyc10g076920.1.1 | Tomato | nucleus | 36.88 | 36.75 |
| CDY65560 | Canola | nucleus | 36.52 | 34.11 |
| CDY51041 | Canola | nucleus | 37.23 | 31.82 |
| CDY17109 | Canola | nucleus | 36.52 | 30.75 |
| CDY18575 | Canola | nucleus | 35.11 | 28.12 |
| CDY10500 | Canola | nucleus | 34.4 | 28.03 |
| CDX92320 | Canola | nucleus | 35.11 | 27.89 |
| CDX75056 | Canola | nucleus | 39.36 | 27.82 |
| CDY68227 | Canola | nucleus | 34.4 | 27.79 |
| CDY08701 | Canola | nucleus | 34.04 | 27.75 |
| CDX99242 | Canola | nucleus | 34.75 | 27.68 |
| CDX84141 | Canola | nucleus | 38.65 | 27.66 |
| CDY43738 | Canola | nucleus | 39.36 | 27.48 |
| CDX69020 | Canola | nucleus | 34.04 | 27.43 |
| CDY63041 | Canola | nucleus | 34.4 | 27.4 |
| CDX82302 | Canola | nucleus | 33.69 | 26.1 |
| CDY58256 | Canola | nucleus | 35.11 | 25.32 |
| CDX72445 | Canola | nucleus | 36.52 | 25.12 |
| CDY54481 | Canola | nucleus | 23.76 | 23.43 |
| CDY22311 | Canola | nucleus, plastid | 21.99 | 23.31 |
| CDY22378 | Canola | nucleus | 31.21 | 22.28 |
| CDX71528 | Canola | nucleus | 30.85 | 22.25 |
| CDX89852 | Canola | nucleus, plastid | 20.92 | 22.01 |
| CDY18197 | Canola | nucleus, plastid | 20.92 | 21.93 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078CVA2 | EnsemblPlants:CDX79959 | ProteinID:CDX79959 | ProteinID:CDX79959.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00132821001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE39E9 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA05g01970D
Coordinates
chrLK031819:-:1047147..1048616
Molecular Weight (calculated)
31695.9 Da
IEP (calculated)
9.600
GRAVY (calculated)
-0.820
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLRGNAEE PISQSLPRQN SLYSLKLHEV QNHLGSSAKP LGSMNLDELL KSVWSAEATN QPPEATEAGL PRQGSLALPR GLSKKTVEEV WRDIQHDKNG
101: SSGNPHGERI DSNNNKRPTL GEITLEDLLL KAGVVTETVL PQNVVNVASN EPWIQYHHPQ HQQQGFMPYP VCEMQEMVSP MNMMMGDAPQ AHGRKRVAPS
201: GGDIVERVVE RMQKKMIKNR ESAARSRARK QQVYTHELEI KVSSLEEENK KLRRLKEVEK ILPSEPPPDP KWKLRRTSSA SF
101: SSGNPHGERI DSNNNKRPTL GEITLEDLLL KAGVVTETVL PQNVVNVASN EPWIQYHHPQ HQQQGFMPYP VCEMQEMVSP MNMMMGDAPQ AHGRKRVAPS
201: GGDIVERVVE RMQKKMIKNR ESAARSRARK QQVYTHELEI KVSSLEEENK KLRRLKEVEK ILPSEPPPDP KWKLRRTSSA SF
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.