Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68227 | Canola | nucleus | 97.14 | 97.42 |
| Bra011485.1-P | Field mustard | nucleus | 92.0 | 73.35 |
| CDX72445 | Canola | nucleus | 85.43 | 72.93 |
| AT4G34000.2 | Thale cress | nucleus | 85.43 | 65.86 |
| CDY65560 | Canola | nucleus | 48.57 | 56.29 |
| CDY28083 | Canola | nucleus | 36.86 | 54.43 |
| CDX99242 | Canola | nucleus | 52.29 | 51.69 |
| CDY18575 | Canola | nucleus | 51.71 | 51.42 |
| CDX92320 | Canola | nucleus | 51.71 | 50.99 |
| CDY17109 | Canola | nucleus | 48.29 | 50.45 |
| CDY51041 | Canola | nucleus | 47.43 | 50.3 |
| CDY63041 | Canola | nucleus | 50.29 | 49.72 |
| Os06t0211200-01 | Rice | nucleus | 44.86 | 48.46 |
| CDX82302 | Canola | nucleus | 49.71 | 47.8 |
| EES07580 | Sorghum | nucleus | 46.86 | 47.4 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 55.14 | 47.19 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 44.86 | 47.15 |
| Os02t0766700-01 | Rice | nucleus | 47.71 | 46.78 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 46.86 | 46.72 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 46.57 | 46.57 |
| Zm00001d037170_P001 | Maize | nucleus | 44.86 | 46.45 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 44.86 | 46.18 |
| PGSC0003DMT400059040 | Potato | nucleus | 48.29 | 46.17 |
| Zm00001d018178_P001 | Maize | nucleus | 46.0 | 45.87 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 46.57 | 45.66 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 46.86 | 45.56 |
| CDY58256 | Canola | nucleus | 50.86 | 45.52 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 44.86 | 45.51 |
| Zm00001d044940_P002 | Maize | nucleus | 45.43 | 45.3 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 44.29 | 45.19 |
| KXG19586 | Sorghum | nucleus | 44.57 | 44.83 |
| Os08t0472000-01 | Rice | nucleus | 40.0 | 44.03 |
| Solyc01g108080.2.1 | Tomato | nucleus | 51.43 | 43.48 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 47.43 | 43.34 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 48.0 | 43.3 |
| OQU80633 | Sorghum | nucleus | 47.14 | 43.19 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 48.86 | 42.96 |
| KRH50289 | Soybean | nucleus | 51.71 | 42.69 |
| OQU78764 | Sorghum | nucleus | 38.0 | 42.63 |
| PGSC0003DMT400066603 | Potato | nucleus | 50.0 | 42.27 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.57 | 42.18 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 48.86 | 42.01 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 43.43 | 41.53 |
| Solyc11g044560.1.1 | Tomato | nucleus | 47.14 | 41.35 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 43.43 | 41.3 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 43.14 | 41.26 |
| EER96850 | Sorghum | nucleus | 43.14 | 41.26 |
| Os09t0456200-01 | Rice | nucleus | 44.29 | 41.22 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 42.86 | 40.87 |
| KRH71134 | Soybean | nucleus | 50.57 | 40.32 |
| CDY27189 | Canola | nucleus | 28.29 | 40.08 |
| KXG26981 | Sorghum | nucleus | 18.86 | 40.0 |
| Solyc10g050210.1.1 | Tomato | nucleus | 44.29 | 39.95 |
| CDX72108 | Canola | nucleus | 28.57 | 39.84 |
| CDY51261 | Canola | nucleus | 28.29 | 39.6 |
| PGSC0003DMT400015892 | Potato | nucleus | 46.0 | 38.89 |
| CDX67659 | Canola | nucleus | 27.71 | 37.45 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 42.29 | 36.72 |
| CDY57581 | Canola | nucleus | 28.29 | 36.4 |
| Zm00001d031790_P002 | Maize | nucleus | 36.86 | 36.13 |
| CDY53679 | Canola | nucleus | 28.29 | 36.13 |
| CDY06946 | Canola | nucleus | 28.29 | 35.87 |
| CDX76014 | Canola | nucleus | 27.71 | 35.79 |
| Zm00001d050018_P007 | Maize | nucleus | 39.71 | 35.55 |
| CDY47381 | Canola | nucleus | 29.14 | 35.17 |
| CDX79959 | Canola | nucleus | 27.43 | 34.04 |
| Zm00001d020711_P001 | Maize | nucleus | 39.14 | 33.83 |
| CDX84141 | Canola | nucleus | 34.0 | 30.2 |
| Zm00001d005884_P002 | Maize | nucleus | 26.0 | 29.84 |
| CDX75056 | Canola | nucleus | 34.0 | 29.82 |
| CDY10500 | Canola | nucleus | 29.43 | 29.77 |
| CDY43738 | Canola | nucleus | 34.29 | 29.7 |
| CDY08701 | Canola | nucleus | 29.14 | 29.48 |
| CDX71528 | Canola | nucleus | 31.14 | 27.88 |
| CDY22378 | Canola | nucleus | 31.14 | 27.59 |
| CDY18197 | Canola | nucleus, plastid | 19.14 | 24.91 |
| CDX89852 | Canola | nucleus, plastid | 18.86 | 24.63 |
| CDY54481 | Canola | nucleus | 19.43 | 23.78 |
| CDY22311 | Canola | nucleus, plastid | 18.0 | 23.68 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078BW55 | EnsemblPlants:CDX69020 | ProteinID:CDX69020 | ProteinID:CDX69020.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00130775001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EE35BC | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaC01g04330D
Coordinates
chrLK031789:+:2486733..2489168
Molecular Weight (calculated)
39045.6 Da
IEP (calculated)
9.873
GRAVY (calculated)
-0.665
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSRFNFVDD AKQPALGTGV PLTRQNSVFS LTFDEFQNSW GGGVGKDFGS MNMDELLKNI WTAEESHSIM ANNTREIGVG GGLQRQGSIT LPRTISQKRV
101: DDVWKELMKD DDAGSGGGGA SGVPQRQQTL GEMTLEEFLA RAGVVREEPQ QQVESVHQPQ QLIQKQQDVA FPKQSTIAFS NTVDLVNRSQ PPTQEVKPSV
201: LGVRDMPMNN NNLLQAVDFK TGVTVAAVSP GSQMSPDLTP KSNMDASLSP VPYMFAGRVR KTGAVLEKVI ERRQKRMIKN RESAARSRAR KQAYTLELEA
301: EVAQLKEQNE ELQRKQVEIM EKQKKQLLEP MRQTWGCKRQ CLRRTLTGPW
101: DDVWKELMKD DDAGSGGGGA SGVPQRQQTL GEMTLEEFLA RAGVVREEPQ QQVESVHQPQ QLIQKQQDVA FPKQSTIAFS NTVDLVNRSQ PPTQEVKPSV
201: LGVRDMPMNN NNLLQAVDFK TGVTVAAVSP GSQMSPDLTP KSNMDASLSP VPYMFAGRVR KTGAVLEKVI ERRQKRMIKN RESAARSRAR KQAYTLELEA
301: EVAQLKEQNE ELQRKQVEIM EKQKKQLLEP MRQTWGCKRQ CLRRTLTGPW
001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
Arabidopsis Description
ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.