Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037533.1-P | Field mustard | nucleus | 92.84 | 93.56 |
| CDY18575 | Canola | nucleus | 83.63 | 92.9 |
| CDY63041 | Canola | nucleus | 73.15 | 80.79 |
| CDX99242 | Canola | nucleus | 73.15 | 80.79 |
| CDX82302 | Canola | nucleus | 74.42 | 79.95 |
| CDX92320 | Canola | nucleus | 71.87 | 79.15 |
| AT3G19290.3 | Thale cress | nucleus | 84.65 | 76.62 |
| CDY28083 | Canola | nucleus | 42.71 | 70.46 |
| CDY51041 | Canola | nucleus | 56.27 | 66.67 |
| CDY65560 | Canola | nucleus | 40.66 | 52.65 |
| CDY68227 | Canola | nucleus | 45.52 | 51.0 |
| CDX69020 | Canola | nucleus | 45.52 | 50.86 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 52.94 | 50.61 |
| CDY17109 | Canola | nucleus | 42.2 | 49.25 |
| EES07580 | Sorghum | nucleus | 42.97 | 48.55 |
| PGSC0003DMT400059040 | Potato | nucleus | 45.27 | 48.36 |
| Os02t0766700-01 | Rice | nucleus | 43.99 | 48.18 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 42.97 | 48.0 |
| Zm00001d018178_P001 | Maize | nucleus | 42.97 | 47.86 |
| Solyc01g108080.2.1 | Tomato | nucleus | 50.64 | 47.83 |
| PGSC0003DMT400066603 | Potato | nucleus | 50.64 | 47.83 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 42.71 | 47.58 |
| Os06t0211200-01 | Rice | nucleus | 39.39 | 47.53 |
| Os08t0472000-01 | Rice | nucleus | 38.62 | 47.48 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 42.97 | 47.06 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 42.71 | 46.39 |
| Zm00001d037170_P001 | Maize | nucleus | 39.9 | 46.15 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 46.8 | 45.98 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 45.01 | 45.95 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 39.13 | 45.95 |
| KRH50289 | Soybean | nucleus | 49.62 | 45.75 |
| CDX72445 | Canola | nucleus | 47.31 | 45.12 |
| EER96850 | Sorghum | nucleus | 42.2 | 45.08 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 39.13 | 45.0 |
| Zm00001d044940_P002 | Maize | nucleus | 40.15 | 44.73 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 44.25 | 44.59 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 41.94 | 44.57 |
| KXG19586 | Sorghum | nucleus | 39.64 | 44.54 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 45.78 | 44.42 |
| Os09t0456200-01 | Rice | nucleus | 42.71 | 44.41 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 39.13 | 44.35 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 38.87 | 44.31 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 41.43 | 44.26 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 41.18 | 43.99 |
| OQU80633 | Sorghum | nucleus | 42.97 | 43.98 |
| KRH71134 | Soybean | nucleus | 49.36 | 43.96 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 41.18 | 43.87 |
| Solyc11g044560.1.1 | Tomato | nucleus | 44.5 | 43.61 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 44.25 | 42.51 |
| OQU78764 | Sorghum | nucleus | 33.76 | 42.31 |
| PGSC0003DMT400015892 | Potato | nucleus | 44.5 | 42.03 |
| Solyc10g050210.1.1 | Tomato | nucleus | 40.92 | 41.24 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 41.94 | 40.69 |
| CDY27189 | Canola | nucleus | 25.32 | 40.08 |
| CDY51261 | Canola | nucleus | 25.58 | 40.0 |
| CDX72108 | Canola | nucleus | 25.58 | 39.84 |
| CDX76014 | Canola | nucleus | 26.09 | 37.64 |
| CDY57581 | Canola | nucleus | 25.83 | 37.13 |
| Zm00001d050018_P007 | Maize | nucleus | 37.08 | 37.08 |
| CDX67659 | Canola | nucleus | 24.55 | 37.07 |
| Zm00001d020711_P001 | Maize | nucleus | 38.36 | 37.04 |
| KXG26981 | Sorghum | nucleus | 15.6 | 36.97 |
| Zm00001d031790_P002 | Maize | nucleus | 33.5 | 36.69 |
| CDY06946 | Canola | nucleus | 25.83 | 36.59 |
| CDY53679 | Canola | nucleus | 25.58 | 36.5 |
| CDY47381 | Canola | nucleus | 26.09 | 35.17 |
| CDX79959 | Canola | nucleus | 25.32 | 35.11 |
| Zm00001d005884_P002 | Maize | nucleus | 25.32 | 32.46 |
| CDX71528 | Canola | nucleus | 31.97 | 31.97 |
| CDY43738 | Canola | nucleus | 32.74 | 31.68 |
| CDY22378 | Canola | nucleus | 31.97 | 31.65 |
| CDX84141 | Canola | nucleus | 31.2 | 30.96 |
| CDX75056 | Canola | nucleus | 31.46 | 30.83 |
| CDY10500 | Canola | nucleus | 26.34 | 29.77 |
| CDY08701 | Canola | nucleus | 26.09 | 29.48 |
| CDX89852 | Canola | nucleus, plastid | 15.6 | 22.76 |
| CDY18197 | Canola | nucleus, plastid | 15.35 | 22.3 |
| CDY22311 | Canola | nucleus, plastid | 15.09 | 22.18 |
| CDY54481 | Canola | nucleus | 16.11 | 22.03 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EnsemblPlants:CDY58256 | ProteinID:CDY58256 | ProteinID:CDY58256.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00023319001 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004377C14 |
| GO:X2GFZ7 | UniProt:X2GFZ7 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaC01g43800DABF4-2.1 [Source:UniProtKB/TrEMBL;Acc:X2GFZ7]
Coordinates
chrLK033650:-:34860..37544
Molecular Weight (calculated)
42658.2 Da
IEP (calculated)
9.912
GRAVY (calculated)
-0.806
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTHINFNNL GGEGMKPTDN AYPLARQSSL YSLTFDELQS TLLGGPGKDL GSMNMDELLK SIWTAEEAQA MTMNPSSAAT AVAQPGGGIP LQRQGSLTLP
101: RTISQKTVDE VWKCLFTKDG NMVGSSGGGG CGESNAPLRQ QTLGEITVEE FLLRAGVVRE DNSNNGFYSN NGAPGGLGFG FCQPNQNNIS FNGTNDSMIL
201: KQPPHQQFQQ QPSQPQLQPR QQLNQPPHPP QQQHPHQRLP QTIFPKQANV AFAGAGNNAS NNNNNGLGNF GGGGVTVAAT SPGTSSAENN SLSPVPYVLN
301: RGRRSNTGLE KVIERRQRRM IKNRESAARS RARKQAYTLE LEAEIEKLKK VNQELQKKQA EMMEMQKNEE SSKQPWGSKR QCLRRTLTGP W
101: RTISQKTVDE VWKCLFTKDG NMVGSSGGGG CGESNAPLRQ QTLGEITVEE FLLRAGVVRE DNSNNGFYSN NGAPGGLGFG FCQPNQNNIS FNGTNDSMIL
201: KQPPHQQFQQ QPSQPQLQPR QQLNQPPHPP QQQHPHQRLP QTIFPKQANV AFAGAGNNAS NNNNNGLGNF GGGGVTVAAT SPGTSSAENN SLSPVPYVLN
301: RGRRSNTGLE KVIERRQRRM IKNRESAARS RARKQAYTLE LEAEIEKLKK VNQELQKKQA EMMEMQKNEE SSKQPWGSKR QCLRRTLTGP W
001: MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VMPLARQSSV YSLTFDELQN TLGGPGKDFG SMNMDELLKS IWTAEEAQAM AMTSAPAATA VAQPGAGIPP
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
Arabidopsis Description
ABF4ABRE binding factor 4 [Source:UniProtKB/TrEMBL;Acc:F4JB53]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.