Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037170_P001 | Maize | nucleus | 89.08 | 91.72 |
| Zm00001d044940_P002 | Maize | nucleus | 89.66 | 88.89 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 73.85 | 77.18 |
| Os06t0211200-01 | Rice | nucleus | 71.84 | 77.16 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 75.29 | 77.06 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 75.29 | 76.38 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 75.29 | 75.94 |
| EES07580 | Sorghum | nucleus | 61.21 | 61.56 |
| CDY65560 | Canola | nucleus | 45.98 | 52.98 |
| KRH52002 | Soybean | cytosol | 14.37 | 51.02 |
| CDY28083 | Canola | nucleus | 33.33 | 48.95 |
| CDY17109 | Canola | nucleus | 45.98 | 47.76 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 53.74 | 46.98 |
| CDY18575 | Canola | nucleus | 45.98 | 45.45 |
| Bra040260.1-P | Field mustard | nucleus | 47.41 | 45.33 |
| CDY68227 | Canola | nucleus | 45.11 | 44.99 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 52.59 | 44.96 |
| CDX69020 | Canola | nucleus | 44.83 | 44.57 |
| EER96850 | Sorghum | nucleus | 46.84 | 44.54 |
| OQU80633 | Sorghum | nucleus | 48.85 | 44.5 |
| CDX99242 | Canola | nucleus | 45.11 | 44.35 |
| OQU78764 | Sorghum | nucleus | 39.66 | 44.23 |
| CDY51041 | Canola | nucleus | 41.67 | 43.94 |
| CDY63041 | Canola | nucleus | 43.97 | 43.22 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 47.99 | 43.04 |
| Bra022409.1-P | Field mustard | nucleus | 43.68 | 42.94 |
| CDX92320 | Canola | nucleus | 43.68 | 42.82 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 49.14 | 42.43 |
| CDX82302 | Canola | nucleus | 44.25 | 42.31 |
| Bra001742.1-P | Field mustard | nucleus | 43.1 | 42.25 |
| KRH61298 | Soybean | nucleus | 50.57 | 42.21 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 46.26 | 42.04 |
| KXG26981 | Sorghum | nucleus | 19.83 | 41.82 |
| PGSC0003DMT400059040 | Potato | nucleus | 43.68 | 41.53 |
| Bra037533.1-P | Field mustard | nucleus | 45.98 | 41.24 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 47.41 | 40.94 |
| Solyc10g050210.1.1 | Tomato | nucleus | 44.83 | 40.21 |
| Solyc01g108080.2.1 | Tomato | nucleus | 47.41 | 39.86 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 46.84 | 39.85 |
| Bra018800.1-P | Field mustard | nucleus | 41.95 | 39.67 |
| CDY58256 | Canola | nucleus | 44.54 | 39.64 |
| AT1G45249.6 | Thale cress | nucleus | 48.85 | 39.44 |
| Solyc04g078840.2.1 | Tomato | nucleus | 50.57 | 39.37 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 50.29 | 39.15 |
| PGSC0003DMT400020670 | Potato | nucleus | 50.86 | 39.07 |
| PGSC0003DMT400066603 | Potato | nucleus | 45.98 | 38.65 |
| KRH50289 | Soybean | nucleus | 46.26 | 37.97 |
| AT3G19290.3 | Thale cress | nucleus | 47.13 | 37.96 |
| Solyc11g044560.1.1 | Tomato | nucleus | 42.82 | 37.34 |
| CDX72445 | Canola | nucleus | 43.97 | 37.32 |
| PGSC0003DMT400015892 | Potato | nucleus | 44.25 | 37.2 |
| AT1G49720.2 | Thale cress | nucleus | 41.95 | 36.23 |
| KRH71134 | Soybean | nucleus | 45.69 | 36.22 |
| KRH52003 | Soybean | nucleus | 33.05 | 34.95 |
| AT4G34000.2 | Thale cress | nucleus | 44.83 | 34.36 |
| EES18419 | Sorghum | nucleus | 31.61 | 33.95 |
| Bra011485.1-P | Field mustard | nucleus | 42.53 | 33.71 |
| EES03785 | Sorghum | nucleus | 31.61 | 33.03 |
| KXG39483 | Sorghum | nucleus | 22.41 | 31.97 |
| KXG33733 | Sorghum | nucleus | 36.49 | 30.9 |
| EES03943 | Sorghum | nucleus | 22.99 | 30.53 |
| AT5G42910.1 | Thale cress | nucleus | 32.18 | 30.27 |
| CDY22378 | Canola | nucleus | 33.05 | 29.11 |
| CDX71528 | Canola | nucleus | 32.18 | 28.64 |
| EES18296 | Sorghum | nucleus, plastid | 21.84 | 28.46 |
| OQU90534 | Sorghum | nucleus | 25.86 | 28.3 |
| Bra033649.1-P | Field mustard | nucleus | 32.47 | 27.29 |
| Bra017621.1-P | Field mustard | cytosol | 23.28 | 27.18 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A194YJ08 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | EnsemblPlants:KXG19586 |
| ProteinID:KXG19586 | ProteinID:KXG19586.1 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF350 | SMART:SM00338 | EnsemblPlantsGene:SORBI_3010G081800 | SUPFAM:SSF57959 | UniParc:UPI0003C6CAF6 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:6998322..7004279
Molecular Weight (calculated)
37363.8 Da
IEP (calculated)
9.895
GRAVY (calculated)
-0.441
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMPGGNGAP SLARQGSVYS LTFDEFQSTL GAGATKDFGS MNMDELLRNI WTAEESNAMA TAAPTTAPAA SVDAHARAQQ QQQTGAPILR QGSFTLSRTL
101: SQKTVDEVWR EIVGFTGGED AQPVAAPAPT PAPAPAPLPA QAQAQAQAQR QQTLGSMTLE EFLVRAGVVR EDMGQQTLVL QPHAQGLFSQ GNAVAPQTMQ
201: LGNGMVAGVV GQGLGGGMTV AAPTTPVVLN GMGKVEAGDL SSLSPVPYPF DTALRVRKGP TVEKVVERRQ RRMIKNRESA ARSRARKQAY IMELEAEVAK
301: LKDQNDELQK KQVEMLKKQK DEVLERINNQ HGPKAKKLCL RRTLTGPW
101: SQKTVDEVWR EIVGFTGGED AQPVAAPAPT PAPAPAPLPA QAQAQAQAQR QQTLGSMTLE EFLVRAGVVR EDMGQQTLVL QPHAQGLFSQ GNAVAPQTMQ
201: LGNGMVAGVV GQGLGGGMTV AAPTTPVVLN GMGKVEAGDL SSLSPVPYPF DTALRVRKGP TVEKVVERRQ RRMIKNRESA ARSRARKQAY IMELEAEVAK
301: LKDQNDELQK KQVEMLKKQK DEVLERINNQ HGPKAKKLCL RRTLTGPW
001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.