Factsheet for Solyc04g078840.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020670	Potato	nucleus	96.42	95.14
CDY65560	Canola	nucleus	44.74	66.23
Bra040260.1-P	Field mustard	nucleus	51.23	62.91
CDY17109	Canola	nucleus	45.86	61.19
AT1G45249.6	Thale cress	nucleus	56.15	58.24
GSMUA_Achr6P30550_001	Banana	nucleus	48.99	55.03
GSMUA_Achr5P24570_001	Banana	nucleus	47.65	54.9
GSMUA_Achr5P05690_001	Banana	nucleus	49.44	54.3
Os06t0211200-01	Rice	nucleus	39.15	54.01
EES07580	Sorghum	nucleus	41.61	53.76
Os02t0766700-01	Rice	nucleus	42.73	53.5
TraesCS6B01G364000.1	Wheat	nucleus	41.61	52.99
TraesCS6A01G333600.2	Wheat	nucleus	41.39	52.86
Solyc01g108080.2.1	Tomato	nucleus	48.77	52.66
Zm00001d018178_P001	Maize	nucleus	41.16	52.42
HORVU6Hr1G080670.1	Barley	nucleus	41.83	52.38
HORVU7Hr1G035500.2	Barley	nucleus	38.93	52.25
GSMUA_Achr3P07000_001	Banana	nucleus	46.98	52.11
GSMUA_Achr9P27130_001	Banana	nucleus	46.98	52.11
GSMUA_Achr6P04270_001	Banana	nucleus	44.52	51.96
Os08t0472000-01	Rice	nucleus	36.69	51.57
TraesCS7B01G075600.1	Wheat	nucleus	39.15	51.47
TraesCS6D01G312800.1	Wheat	nucleus	41.39	51.39
Zm00001d037170_P001	Maize	nucleus	38.48	50.89
Solyc10g050210.1.1	Tomato	nucleus	44.07	50.77
TraesCS7A01G170600.1	Wheat	nucleus	38.93	50.73
TraesCS7D01G171300.1	Wheat	nucleus	39.15	50.72
KXG19586	Sorghum	nucleus	39.37	50.57
Zm00001d044940_P002	Maize	nucleus	39.15	49.86
OQU80633	Sorghum	nucleus	42.51	49.74
OQU78764	Sorghum	nucleus	34.68	49.68
Solyc11g044560.1.1	Tomato	nucleus	43.62	48.87
Os09t0456200-01	Rice	nucleus	39.6	47.07
TraesCS5B01G235600.2	Wheat	nucleus	38.26	46.72
TraesCS5D01G244500.1	Wheat	nucleus	38.26	46.72
HORVU5Hr1G068230.1	Barley	nucleus	38.26	46.59
TraesCS5A01G237200.2	Wheat	nucleus	38.26	46.47
EER96850	Sorghum	nucleus	38.03	46.45
KXG26981	Sorghum	nucleus	17.0	46.06
Zm00001d031790_P002	Maize	nucleus	34.68	43.42
Zm00001d050018_P007	Maize	nucleus	36.02	41.18
Zm00001d020711_P001	Maize	nucleus	35.57	39.26
Solyc01g008980.2.1	Tomato	nucleus	12.53	38.36
Solyc10g076920.1.1	Tomato	nucleus	22.82	36.04
Solyc10g081350.1.1	Tomato	nucleus	28.19	36.0
Solyc09g009490.2.1	Tomato	nucleus	33.78	35.45
Zm00001d005884_P002	Maize	nucleus	23.49	34.43
Solyc01g104650.2.1	Tomato	nucleus	19.02	28.62
Solyc04g071510.2.1	Tomato	nucleus, plastid	19.46	28.25
Solyc01g009510.1.1	Tomato	nucleus	11.19	26.32

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EMBL:AY530758	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EMBL:MF062689	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF368	UniProt:Q6QPK1	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:Solyc04g078840.2	EnsemblPlants:Solyc04g078840.2.1	UniParc:UPI0000241A73	InterPro:bZIP	SEG:seg

Description

ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:Projected from Arabidopsis thaliana (AT4G34000) UniProtKB/Swiss-Prot;Acc:Q9M7Q3]

Coordinates

chr4:-:63500731..63504038

Molecular Weight (calculated)

47980.7 Da

IEP (calculated)

9.947

GRAVY (calculated)

-0.694

Length

447 amino acids

Sequence
(BLAST)

001: MGSNYHFKNF GNEPPGEGGS GGGGKQPGNF GLPRQPSIYS LTFDEFLSST GGSGKDFGSM NMDELLKNIW NAEENQTIGG PGINGQEVGV PGGHLQRQGS
101: LTLPRTLSHK TVDEVWRDMS KEHGGGKDGN SVGVPPNIPQ TQRQQNLGEI TLEEFLVRAG VVREDAQFAA KSNNAGGIFG DLSYAGNNTG LAFGYHQANS
201: RNTGLMAGSI PNKNGETVIQ SANLPLNVNG VRSTQQQLRP QQLQQNQQSQ PQQQPIFPKQ PALPYGAPMA IPNSGQLGSP GMRAGMVGIP DPALNSNFIQ
301: GASLMGGGMN MVGLGASGVT VATASPGVSS SDGLGKSNGD TPSVSPVPYV FNGGLRGRKY STVEKVVERR QRRMIKNRES AARSRARKQA YTMELEAEVA
401: KLKEENDELQ KKQEEMLEMQ KNQVIEMMNL QKGAKRRCLR RTQTGPW

Best Arabidopsis Sequence Match ( AT1G45249.1 )
(BLAST)

001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW

Arabidopsis Description

ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.