Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040260.1-P | Field mustard | nucleus | 73.78 | 87.36 |
| CDY65560 | Canola | nucleus | 59.63 | 85.1 |
| CDY17109 | Canola | nucleus | 63.11 | 81.19 |
| Solyc04g078840.2.1 | Tomato | nucleus | 58.24 | 56.15 |
| PGSC0003DMT400020670 | Potato | nucleus | 58.0 | 55.19 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 48.72 | 52.76 |
| Os06t0211200-01 | Rice | nucleus | 39.21 | 52.16 |
| EES07580 | Sorghum | nucleus | 41.3 | 51.45 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 41.76 | 51.28 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 41.3 | 50.86 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 47.33 | 50.62 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 45.48 | 50.52 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 38.98 | 50.45 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 47.56 | 50.37 |
| Os02t0766700-01 | Rice | nucleus | 41.53 | 50.14 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 41.53 | 50.14 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 41.53 | 49.72 |
| Zm00001d037170_P001 | Maize | nucleus | 38.98 | 49.7 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 38.98 | 49.41 |
| Os08t0472000-01 | Rice | nucleus | 36.19 | 49.06 |
| Zm00001d018178_P001 | Maize | nucleus | 39.91 | 49.0 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 45.71 | 48.88 |
| KXG19586 | Sorghum | nucleus | 39.44 | 48.85 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 38.98 | 48.7 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 38.75 | 48.69 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 42.92 | 48.3 |
| EER96850 | Sorghum | nucleus | 40.6 | 47.81 |
| OQU78764 | Sorghum | nucleus | 34.34 | 47.44 |
| Os09t0456200-01 | Rice | nucleus | 41.3 | 47.34 |
| Zm00001d044940_P002 | Maize | nucleus | 38.52 | 47.29 |
| OQU80633 | Sorghum | nucleus | 41.76 | 47.12 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 39.44 | 46.45 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 39.21 | 45.92 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 38.98 | 45.9 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 38.75 | 45.5 |
| AT3G19290.3 | Thale cress | nucleus | 45.01 | 44.91 |
| KXG26981 | Sorghum | nucleus | 16.47 | 43.03 |
| Zm00001d031790_P002 | Maize | nucleus | 34.8 | 42.02 |
| AT4G34000.2 | Thale cress | nucleus | 44.08 | 41.85 |
| AT2G41070.4 | Thale cress | nucleus | 25.99 | 41.33 |
| AT1G49720.2 | Thale cress | nucleus | 38.28 | 40.94 |
| Zm00001d050018_P007 | Maize | nucleus | 36.43 | 40.15 |
| AT5G42910.1 | Thale cress | nucleus | 34.34 | 40.0 |
| Zm00001d020711_P001 | Maize | nucleus | 37.12 | 39.51 |
| AT3G56850.1 | Thale cress | nucleus | 26.91 | 39.06 |
| AT3G44460.1 | Thale cress | nucleus | 26.45 | 34.44 |
| Zm00001d005884_P002 | Maize | nucleus | 24.13 | 34.1 |
| AT2G36270.3 | Thale cress | nucleus | 33.18 | 32.21 |
| AT5G44080.1 | Thale cress | nucleus | 19.03 | 26.03 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 14.39 | 22.96 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:841095 | UniProt:A0A1P8AV75 | EMBL:AB017160 | Symbol:ABF2 |
| EMBL:AC084820 | ProteinID:AEE32110.1 | EMBL:AF093545 | ProteinID:ANM60530.1 | ProteinID:ANM60535.1 | ArrayExpress:AT1G45249 |
| EnsemblPlantsGene:AT1G45249 | RefSeq:AT1G45249 | TAIR:AT1G45249 | RefSeq:AT1G45249-TAIR-G | EnsemblPlants:AT1G45249.6 | Unigene:At.48130 |
| EMBL:BT026443 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | InterPro:IPR004827 |
| RefSeq:NP_001322811.1 | RefSeq:NP_001322815.1 | RefSeq:NP_849777.1 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF368 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000848B836 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
Coordinates
chr1:-:17165125..17167741
Molecular Weight (calculated)
45886.3 Da
IEP (calculated)
10.062
GRAVY (calculated)
-0.567
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQIQLLGGS RFCRKMDGSM NLGNEPPGDG GGGGGLTRQG SIYSLTFDEF QSSVGKDFGS MNMDELLKNI WSAEETQAMA SGVVPVLGGG QEGLQLQRQG
101: SLTLPRTLSQ KTVDQVWKDL SKVGSSGVGG SNLSQVAQAQ SQSQSQRQQT LGEVTLEEFL VRAGVVREEA QVAARAQIAE NNKGGYFGND ANTGFSVEFQ
201: QPSPRVVAAG VMGNLGAETA NSLQVQGSSL PLNVNGARTT YQQSQQQQPI MPKQPGFGYG TQMGQLNSPG IRGGGLVGLG DQSLTNNVGF VQGASAAIPG
301: ALGVGAVSPV TPLSSEGIGK SNGDSSSLSP SPYMFNGGVR GRKSGTVEKV VERRQRRMIK NRESAARSRA RKQAYTVELE AEVAKLKEEN DELQRKQARI
401: MEMQKNQETE MRNLLQGGPK KKLRRTESGP W
101: SLTLPRTLSQ KTVDQVWKDL SKVGSSGVGG SNLSQVAQAQ SQSQSQRQQT LGEVTLEEFL VRAGVVREEA QVAARAQIAE NNKGGYFGND ANTGFSVEFQ
201: QPSPRVVAAG VMGNLGAETA NSLQVQGSSL PLNVNGARTT YQQSQQQQPI MPKQPGFGYG TQMGQLNSPG IRGGGLVGLG DQSLTNNVGF VQGASAAIPG
301: ALGVGAVSPV TPLSSEGIGK SNGDSSSLSP SPYMFNGGVR GRKSGTVEKV VERRQRRMIK NRESAARSRA RKQAYTVELE AEVAKLKEEN DELQRKQARI
401: MEMQKNQETE MRNLLQGGPK KKLRRTESGP W
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.