Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G075600.1 | Wheat | nucleus | 96.7 | 94.71 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 95.5 | 92.71 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 95.8 | 92.46 |
| Os06t0211200-01 | Rice | nucleus | 74.17 | 76.23 |
| KXG19586 | Sorghum | nucleus | 77.18 | 73.85 |
| Zm00001d037170_P001 | Maize | nucleus | 74.47 | 73.37 |
| Zm00001d044940_P002 | Maize | nucleus | 75.38 | 71.51 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 62.46 | 58.26 |
| CDY65560 | Canola | nucleus | 47.15 | 51.99 |
| KRH52002 | Soybean | cytosol | 14.41 | 48.98 |
| CDY28083 | Canola | nucleus | 34.83 | 48.95 |
| CDY17109 | Canola | nucleus | 47.75 | 47.46 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 54.65 | 45.73 |
| CDY68227 | Canola | nucleus | 47.45 | 45.27 |
| CDX69020 | Canola | nucleus | 47.15 | 44.86 |
| Bra040260.1-P | Field mustard | nucleus | 48.95 | 44.78 |
| CDY18575 | Canola | nucleus | 47.15 | 44.6 |
| CDX99242 | Canola | nucleus | 47.15 | 44.35 |
| CDY51041 | Canola | nucleus | 43.84 | 44.24 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 48.65 | 44.14 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 50.45 | 43.3 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 52.85 | 43.24 |
| Bra022409.1-P | Field mustard | nucleus | 45.35 | 42.66 |
| CDX92320 | Canola | nucleus | 45.35 | 42.54 |
| CDY63041 | Canola | nucleus | 44.74 | 42.09 |
| Bra001742.1-P | Field mustard | nucleus | 44.74 | 41.97 |
| CDX82302 | Canola | nucleus | 45.65 | 41.76 |
| KRH61298 | Soybean | nucleus | 51.05 | 40.77 |
| Bra037533.1-P | Field mustard | nucleus | 47.45 | 40.72 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 46.55 | 40.47 |
| PGSC0003DMT400059040 | Potato | nucleus | 44.44 | 40.44 |
| Bra018800.1-P | Field mustard | nucleus | 44.44 | 40.22 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.65 | 40.2 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 48.35 | 39.95 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 48.35 | 39.36 |
| CDY58256 | Canola | nucleus | 45.95 | 39.13 |
| Solyc01g108080.2.1 | Tomato | nucleus | 48.65 | 39.13 |
| AT1G45249.6 | Thale cress | nucleus | 50.45 | 38.98 |
| Solyc04g078840.2.1 | Tomato | nucleus | 52.25 | 38.93 |
| Solyc10g050210.1.1 | Tomato | nucleus | 45.35 | 38.92 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 51.95 | 38.7 |
| CDX72445 | Canola | nucleus | 46.85 | 38.05 |
| PGSC0003DMT400020670 | Potato | nucleus | 51.65 | 37.97 |
| HORVU2Hr1G017020.2 | Barley | nucleus | 12.61 | 37.5 |
| PGSC0003DMT400066603 | Potato | nucleus | 46.55 | 37.44 |
| AT3G19290.3 | Thale cress | nucleus | 48.35 | 37.27 |
| KRH50289 | Soybean | nucleus | 46.85 | 36.79 |
| Solyc11g044560.1.1 | Tomato | nucleus | 43.84 | 36.59 |
| PGSC0003DMT400015892 | Potato | nucleus | 45.35 | 36.47 |
| KRH71134 | Soybean | nucleus | 46.55 | 35.31 |
| AT1G49720.2 | Thale cress | nucleus | 42.34 | 34.99 |
| AT4G34000.2 | Thale cress | nucleus | 47.15 | 34.58 |
| KRH52003 | Soybean | nucleus | 33.63 | 34.04 |
| Bra011485.1-P | Field mustard | nucleus | 44.74 | 33.94 |
| HORVU1Hr1G068760.1 | Barley | nucleus | 32.73 | 32.93 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 20.72 | 31.22 |
| HORVU3Hr1G079640.5 | Barley | nucleus | 30.93 | 30.56 |
| AT5G42910.1 | Thale cress | nucleus | 33.93 | 30.54 |
| HORVU5Hr1G045180.1 | Barley | nucleus | 28.53 | 30.35 |
| HORVU0Hr1G023640.4 | Barley | nucleus | 30.93 | 29.51 |
| CDX71528 | Canola | nucleus | 33.33 | 28.39 |
| Bra017621.1-P | Field mustard | cytosol | 25.23 | 28.19 |
| CDY22378 | Canola | nucleus | 33.33 | 28.1 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 35.44 | 27.9 |
| Bra033649.1-P | Field mustard | nucleus | 33.63 | 27.05 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 18.92 | 25.1 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A287W1I7 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:HORVU7Hr1G035500 | EnsemblPlants:HORVU7Hr1G035500.2 |
| InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF350 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000B47760E | InterPro:bZIP | SEG:seg | : |
Description
No Description!
Coordinates
chrchr7H:-:78901175..78906521
Molecular Weight (calculated)
36186.5 Da
IEP (calculated)
9.128
GRAVY (calculated)
-0.462
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMPGGSGGG ALARQGSIYS LTFDEFQSAL GGAGKDFGSM NMDELLRNIW TAEESNAIAA TLTTATTAVP TSNVDAQPQP PPPQQQQQAI LRQGSITLPR
101: TLSQMTVDEV WRDIMGFCDE EPPPPPAPAP AQAERQQTLG RMTLEEFLVR AGVVREDMGG QTVVVPARAQ ALFPQGNVVA PTMQVGNGVV HGVVGQGAGV
201: PMTVAAPTTP GVLNGFGKME GGDLSSLSPV PYPFDTVTRA RKGPTVEKVV ERRQRRMIKN RESAARSRQR KQAYIMELEA EVAKLKENNE ALQKKQQVEM
301: LQKQKDEVIE RIEKQLGPKA KRFCLRRTLT GPW
101: TLSQMTVDEV WRDIMGFCDE EPPPPPAPAP AQAERQQTLG RMTLEEFLVR AGVVREDMGG QTVVVPARAQ ALFPQGNVVA PTMQVGNGVV HGVVGQGAGV
201: PMTVAAPTTP GVLNGFGKME GGDLSSLSPV PYPFDTVTRA RKGPTVEKVV ERRQRRMIKN RESAARSRQR KQAYIMELEA EVAKLKENNE ALQKKQQVEM
301: LQKQKDEVIE RIEKQLGPKA KRFCLRRTLT GPW
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.