Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_04s0069g01150.t01 | Wine grape | nucleus | 36.61 | 71.93 |
| VIT_12s0034g00110.t01 | Wine grape | nucleus | 38.39 | 43.43 |
| TraesCS2B01G115700.1 | Wheat | nucleus | 96.43 | 39.42 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 96.43 | 39.42 |
| TraesCS2D01G098700.1 | Wheat | nucleus | 94.64 | 38.97 |
| GSMUA_Achr6P15970_001 | Banana | nucleus | 50.89 | 29.38 |
| Os07t0686100-01 | Rice | nucleus | 66.96 | 27.37 |
| GSMUA_Achr8P21560_001 | Banana | nucleus | 52.68 | 24.79 |
| Zm00001d022550_P001 | Maize | nucleus | 60.71 | 23.86 |
| GSMUA_Achr10P... | Banana | nucleus | 49.11 | 23.5 |
| OQU90534 | Sorghum | nucleus | 59.82 | 21.07 |
| KRH13203 | Soybean | nucleus | 53.57 | 19.87 |
| KRH44714 | Soybean | nucleus | 53.57 | 18.58 |
| VIT_13s0175g00120.t01 | Wine grape | nucleus | 53.57 | 18.46 |
| HORVU1Hr1G068760.1 | Barley | nucleus | 54.46 | 18.43 |
| Solyc01g009510.1.1 | Tomato | nucleus | 31.25 | 18.42 |
| KRH56272 | Soybean | nucleus | 51.79 | 18.35 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 32.14 | 17.82 |
| KRH62689 | Soybean | nucleus | 49.11 | 17.41 |
| HORVU5Hr1G045180.1 | Barley | nucleus | 48.21 | 17.25 |
| HORVU0Hr1G023640.4 | Barley | nucleus | 50.0 | 16.05 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 29.46 | 14.93 |
| HORVU3Hr1G079640.5 | Barley | nucleus | 42.86 | 14.24 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 28.57 | 12.75 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 37.5 | 12.61 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 37.5 | 11.44 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 35.71 | 11.2 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 37.5 | 9.93 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A287H794 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU2Hr1G017020 | EnsemblPlants:HORVU2Hr1G017020.2 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF211 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000B4810B6 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:39326257..39327426
Molecular Weight (calculated)
13141.8 Da
IEP (calculated)
10.809
GRAVY (calculated)
-1.150
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: KRGAAVVGGD GVVEKTVERR QKRMIKNRES AARSRARKQA YTNELENKIS RLEEEIEHLK ELKKLEPVMQ FMPQQEAGER QHHLRRQAVL YMPQPEAEPK
101: QHQLRRINSA SF
101: QHQLRRINSA SF
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.