Factsheet for HORVU0Hr1G023640.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G068760.1	Barley	nucleus	88.54	93.35
TraesCS1B01G317100.1	Wheat	nucleus	80.8	87.58
TraesCS1D01G306000.1	Wheat	nucleus	81.95	87.46
TraesCS1A01G306300.1	Wheat	nucleus	80.23	86.42
VIT_04s0069g01150.t01	Wine grape	nucleus	12.32	75.44
Os05t0489700-01	Rice	nucleus	68.77	71.64
EES18419	Sorghum	nucleus	65.04	70.06
Zm00001d010638_P001	Maize	nucleus	62.46	63.37
GSMUA_AchrUn_...	Banana	nucleus	47.28	60.22
HORVU3Hr1G079640.5	Barley	nucleus	55.59	57.57
GSMUA_Achr11P...	Banana	nucleus	39.83	57.2
VIT_13s0175g00120.t01	Wine grape	nucleus	48.14	51.69
HORVU2Hr1G017020.2	Barley	nucleus	16.05	50.0
KRH44714	Soybean	nucleus	44.13	47.68
KRH13203	Soybean	nucleus	40.97	47.35
KRH56272	Soybean	nucleus	42.12	46.52
KRH62689	Soybean	nucleus	42.12	46.52
HORVU5Hr1G045180.1	Barley	nucleus	40.69	45.37
VIT_12s0034g00110.t01	Wine grape	nucleus	12.32	43.43
HORVU7Hr1G035500.2	Barley	nucleus	29.51	30.93
HORVU3Hr1G083250.2	Barley	nucleus	19.2	30.32
HORVU5Hr1G068230.1	Barley	nucleus	30.66	29.16
Solyc01g009510.1.1	Tomato	nucleus	15.47	28.42
HORVU6Hr1G080670.1	Barley	nucleus	26.93	26.33
HORVU3Hr1G084360.2	Barley	nucleus	31.23	25.77
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	18.34	25.5

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287E8D8	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU0Hr1G023640	EnsemblPlants:HORVU0Hr1G023640.4	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF234	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B48552C	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:119245771..119249430

Molecular Weight (calculated)

37943.0 Da

IEP (calculated)

7.133

GRAVY (calculated)

-0.630

Length

349 amino acids

Sequence
(BLAST)

001: MIQAMASQSQ AGGGGTGCYA GPGQREQPQG LARQGSLYSL TLDEVQSQLT EPLLSMNLDE LLKSVFPEGM DPVGGVAGQS EPTLGLHRQG SITMPPELSK
101: KTVDEVWKGI QDSPKRSGEE GSRRRRERQP TFGEMTLEDF LVKAGVVAEG HLKDSMDLPA NMGAIGSSVI AAAAPSLNPG AHWLQQYQQQ TLEPQHPSMA
201: GPFMAGHLGP QPLAVATGAI MESIYPDGQI TSPMLDAHSD PQTSGRKRGA SDGIPDKVVE RRQKRMIKNR ESAARSRARK QAYTNELENK VSRLEEENER
301: LKKQKGVGDD DNLCASPRTQ VSTPENKFCT RLRSIVNFVD YTARMFSVV

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.