Factsheet for HORVU1Hr1G074960.8

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G273100.1	Wheat	nucleus	80.48	80.16
TraesCS1A01G273000.1	Wheat	nucleus	80.08	79.45
TraesCS1B01G282800.1	Wheat	nucleus	79.68	79.37
Os05t0437700-01	Rice	plastid	67.73	68.83
EES18296	Sorghum	nucleus, plastid	60.56	56.93
Zm00001d038311_P001	Maize	nucleus	55.78	55.12
HORVU3Hr1G083250.2	Barley	nucleus	47.01	53.39
GSMUA_Achr9P08900_001	Banana	nucleus	40.64	41.13
GSMUA_Achr3P22470_001	Banana	nucleus	40.24	39.45
KRH10463	Soybean	nucleus	19.12	36.92
GSMUA_Achr10P...	Banana	nucleus	37.45	35.21
GSMUA_Achr2P20490_001	Banana	nucleus	33.47	34.57
KRH43979	Soybean	nucleus	21.51	33.75
VIT_18s0072g00470.t01	Wine grape	nucleus, plastid	36.26	33.09
VIT_12s0055g00420.t01	Wine grape	nucleus	37.05	31.1
Solyc01g104650.2.1	Tomato	nucleus	35.06	29.63
PGSC0003DMT400076576	Potato	nucleus	33.47	29.58
KRH58352	Soybean	nucleus	26.29	29.46
CDY54481	Canola	nucleus	32.67	28.67
HORVU2Hr1G017020.2	Barley	nucleus	12.75	28.57
CDY22311	Canola	nucleus, plastid	30.28	28.57
KRH42235	Soybean	nucleus, plastid	27.09	28.45
Bra033719.1-P	Field mustard	nucleus, plastid	29.48	27.82
Solyc04g071510.2.1	Tomato	nucleus, plastid	33.47	27.27
KRH35126	Soybean	nucleus	26.69	27.13
AT1G03970.1	Thale cress	nucleus, plastid	29.08	27.04
Bra015281.1-P	Field mustard	nucleus, plastid	28.29	26.49
CDY18197	Canola	nucleus, plastid	28.29	26.39
CDX89852	Canola	nucleus, plastid	27.89	26.12
AT5G44080.1	Thale cress	nucleus	31.87	25.4
HORVU1Hr1G068760.1	Barley	nucleus	25.9	19.64
HORVU5Hr1G045180.1	Barley	nucleus	24.3	19.49
HORVU7Hr1G035500.2	Barley	nucleus	25.1	18.92
HORVU3Hr1G079640.5	Barley	nucleus	24.7	18.4
HORVU0Hr1G023640.4	Barley	nucleus	25.5	18.34
HORVU6Hr1G080670.1	Barley	nucleus	24.3	17.09
HORVU3Hr1G084360.2	Barley	nucleus	28.29	16.78
HORVU5Hr1G068230.1	Barley	nucleus	23.11	15.8

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287G9F8	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU1Hr1G074960	EnsemblPlants:HORVU1Hr1G074960.8	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF175	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B461FCA	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:509526265..509527632

Molecular Weight (calculated)

25332.0 Da

IEP (calculated)

10.078

GRAVY (calculated)

-0.518

Length

251 amino acids

Sequence
(BLAST)

001: GRRGAHRAAG RQRMASSRVM AASSQPPPSG TSDLARFRSA SGIGSMNMDD ILRNIYGEAP PSGAGDPAPA XXXXXXXXPA PAPEPAARRT AEEVWKEISA
101: TGGLSAPAPA PPPAGGGGGE AGGAAVMTLE DFLAREDDGM VTAVEGNMAV GFPDVGAGVA GGRRRGGGAG GRARKRALMD PMDRAATQRQ KRMIKNRESA
201: ARSRERKQAY IAELEAQVTQ LEEEHAELLR EQRLMAEQSV SFIKIEHVGA L

Best Arabidopsis Sequence Match ( AT5G44080.1 )
(BLAST)

001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW

Arabidopsis Description

Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.