Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- endoplasmic reticulum 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P08900_001 | Banana | nucleus | 53.09 | 52.02 |
| KRH10463 | Soybean | nucleus | 27.16 | 50.77 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 48.97 | 46.48 |
| KRH43979 | Soybean | nucleus | 30.45 | 46.25 |
| Zm00001d042721_P001 | Maize | nucleus | 46.5 | 43.46 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 39.51 | 43.44 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 44.03 | 42.8 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 48.15 | 42.55 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 43.62 | 42.4 |
| EES03943 | Sorghum | nucleus | 45.68 | 42.37 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 43.21 | 40.86 |
| GSMUA_Achr10P... | Banana | nucleus | 44.44 | 40.45 |
| Os01t0867300-01 | Rice | nucleus | 43.62 | 39.85 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 47.74 | 38.8 |
| TraesCS1D01G273100.1 | Wheat | nucleus | 39.92 | 38.49 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 39.92 | 38.49 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 39.92 | 38.34 |
| PGSC0003DMT400076576 | Potato | nucleus | 42.8 | 36.62 |
| Zm00001d038311_P001 | Maize | nucleus | 38.27 | 36.61 |
| KRH58352 | Soybean | nucleus | 33.74 | 36.61 |
| KRH42235 | Soybean | nucleus, plastid | 35.8 | 36.4 |
| Zm00001d012273_P001 | Maize | plastid | 36.21 | 36.07 |
| EES18296 | Sorghum | nucleus, plastid | 39.51 | 35.96 |
| Solyc01g104650.2.1 | Tomato | nucleus | 43.21 | 35.35 |
| KRH35126 | Soybean | nucleus | 35.8 | 35.22 |
| CDY54481 | Canola | nucleus | 39.51 | 33.57 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 34.57 | 33.47 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 42.39 | 33.44 |
| Os05t0437700-01 | Rice | plastid | 33.74 | 33.2 |
| CDY22311 | Canola | nucleus, plastid | 35.8 | 32.71 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 36.21 | 32.59 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 34.98 | 31.95 |
| GSMUA_Achr8P21560_001 | Banana | nucleus | 31.28 | 31.93 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 34.57 | 31.34 |
| CDY18197 | Canola | nucleus, plastid | 34.57 | 31.23 |
| CDX89852 | Canola | nucleus, plastid | 34.16 | 30.97 |
| AT5G44080.1 | Thale cress | nucleus | 38.68 | 29.84 |
| GSMUA_Achr6P15970_001 | Banana | nucleus | 23.05 | 28.87 |
| GSMUA_Achr11P... | Banana | nucleus | 28.81 | 28.81 |
| GSMUA_Achr10P... | Banana | nucleus | 27.16 | 28.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.28 | 27.74 |
| GSMUA_Achr2P07520_001 | Banana | nucleus | 24.69 | 27.52 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 21.4 | 25.74 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 33.74 | 23.63 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 37.45 | 23.45 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 33.74 | 23.36 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 34.57 | 21.93 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 35.8 | 21.86 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 36.21 | 21.62 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 34.98 | 21.09 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 34.16 | 20.6 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr2G20490_001 | EnsemblPlants:GSMUA_Achr2P20490_001 | EnsemblPlants:GSMUA_Achr2T20490_001 | InterPro:IPR004827 |
| UniProt:M0S9P0 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00029612B9 | InterPro:bZIP | SEG:seg | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G20490_001]
Coordinates
chr2:-:20306855..20311415
Molecular Weight (calculated)
26696.6 Da
IEP (calculated)
5.460
GRAVY (calculated)
-0.460
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPSSSASS DVARQSSAYA SAASCDQTEA LGSVSMDHLL RGFCAQPPFP LPLPRNAAGT TADVVWEIPD GAGSGYEDAA AGADGEVTLE EFLARTGAVR
101: EEDVGVSTGF VVDPAIGGRF CQQEQQLPLE NPMLGFGSAL ESGGRRARKR VVLDDPVDKV VLRRQKRMIK NRESAARSRE RKQAYTVELE SLVTRLEEEN
201: VTLVREQEEQ HKMRFQQLMV NIIPVNESRK PLPVLRRTHS MQW
101: EEDVGVSTGF VVDPAIGGRF CQQEQQLPLE NPMLGFGSAL ESGGRRARKR VVLDDPVDKV VLRRQKRMIK NRESAARSRE RKQAYTVELE SLVTRLEEEN
201: VTLVREQEEQ HKMRFQQLMV NIIPVNESRK PLPVLRRTHS MQW
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Arabidopsis Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.