Factsheet for GSMUA_Achr8P07740_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P32830_001
GSMUA_Achr5P01470_001
GSMUA_Achr6P34980_001
GSMUA_Achr9P09330_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	GSMUA_Achr4P32830_001	AT1G13740.1	18484180
AT3G44460.1	GSMUA_Achr5P01470_001	AT1G13740.1	18484180
AT3G44460.1	GSMUA_Achr6P34980_001	AT1G13740.1	18484180
AT3G44460.1	GSMUA_Achr9P09330_001	AT1G13740.1	18484180
AT3G44460.1	GSMUA_Achr4P32830_001	AT1G69260.1	18484180
AT3G44460.1	GSMUA_Achr5P01470_001	AT1G69260.1	18484180
AT3G44460.1	GSMUA_Achr6P34980_001	AT1G69260.1	18484180
AT3G44460.1	GSMUA_Achr9P09330_001	AT1G69260.1	18484180
AT3G44460.1	GSMUA_Achr4P32830_001	AT3G02140.1	18484180
AT3G44460.1	GSMUA_Achr5P01470_001	AT3G02140.1	18484180
AT3G44460.1	GSMUA_Achr6P34980_001	AT3G02140.1	18484180
AT3G44460.1	GSMUA_Achr9P09330_001	AT3G02140.1	18484180
AT3G44460.1	GSMUA_Achr4P32830_001	AT3G29575.1	18484180
AT3G44460.1	GSMUA_Achr5P01470_001	AT3G29575.1	18484180
AT3G44460.1	GSMUA_Achr6P34980_001	AT3G29575.1	18484180
AT3G44460.1	GSMUA_Achr9P09330_001	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P22710_001	Banana	nucleus	67.15	66.38
CDX84141	Canola	nucleus	49.28	43.4
CDX75056	Canola	nucleus	49.86	43.36
Bra017251.1-P	Field mustard	nucleus	48.41	42.42
CDY43738	Canola	nucleus	48.41	41.58
VIT_08s0007g03420.t01	Wine grape	nucleus	47.84	41.5
PGSC0003DMT400006851	Potato	nucleus	50.72	41.12
Solyc09g009490.2.1	Tomato	nucleus	50.14	40.85
KRG96191	Soybean	nucleus	45.53	40.83
Bra005287.1-P	Field mustard	nucleus	49.86	39.5
KRH32737	Soybean	nucleus	49.57	38.48
GSMUA_Achr8P21560_001	Banana	nucleus	26.22	38.24
AT2G36270.3	Thale cress	nucleus	47.55	37.16
KRH20056	Soybean	nucleus	51.87	36.44
AT3G44460.1	Thale cress	nucleus	34.29	35.95
GSMUA_Achr6P15970_001	Banana	nucleus	19.88	35.57
GSMUA_Achr11P...	Banana	nucleus	24.78	35.39
Os01t0859300-01	Rice	nucleus	32.56	34.98
VIT_06s0080g00340.t01	Wine grape	nucleus	32.56	34.88
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	19.88	34.16
KRH22688	Soybean	nucleus	32.85	33.93
Bra019436.1-P	Field mustard	nucleus	32.85	33.93
GSMUA_Achr2P20490_001	Banana	nucleus	23.63	33.74
GSMUA_Achr6P30550_001	Banana	nucleus	38.62	33.67
TraesCS3D01G364900.1	Wheat	nucleus	37.75	33.59
CDY08701	Canola	nucleus	33.43	33.53
CDY10500	Canola	nucleus	33.43	33.53
GSMUA_AchrUn_...	Banana	nucleus	26.22	33.21
KXG33733	Sorghum	nucleus	39.19	33.09
GSMUA_Achr5P24570_001	Banana	nucleus	36.6	32.73
GSMUA_Achr2P07520_001	Banana	nucleus	20.46	32.57
TraesCS3A01G371800.1	Wheat	nucleus	36.6	32.48
GSMUA_Achr6P04270_001	Banana	nucleus	35.73	32.38
TraesCS3B01G404200.1	Wheat	nucleus	36.02	32.05
Zm00001d012296_P001	Maize	nucleus	38.04	32.04
TraesCS3B01G404600.1	Wheat	nucleus	35.45	31.78
TraesCS3B01G404300.1	Wheat	nucleus	35.73	31.71
GSMUA_Achr10P...	Banana	nucleus	21.33	31.62
GSMUA_Achr9P08900_001	Banana	nucleus	22.48	31.45
GSMUA_Achr9P27130_001	Banana	nucleus	36.31	31.27
GSMUA_Achr3P22470_001	Banana	nucleus	23.05	31.25
GSMUA_Achr5P05690_001	Banana	nucleus	36.6	31.2
TraesCS3B01G404400.1	Wheat	nucleus	35.16	31.2
TraesCS3B01G404500.1	Wheat	nucleus	34.87	30.95
TraesCS3A01G371900.3	Wheat	nucleus	33.43	30.37
Zm00001d042779_P001	Maize	nucleus	33.43	30.29
TraesCS3D01G365500.1	Wheat	nucleus	33.14	30.03
TraesCS3A01G372000.1	Wheat	nucleus	32.56	29.5
KRH37750	Soybean	nucleus	17.87	29.38
HORVU3Hr1G084360.2	Barley	nucleus	35.73	29.31
TraesCS3A01G372200.1	Wheat	nucleus	31.7	28.8
TraesCS3D01G365000.1	Wheat	nucleus	32.85	28.79
GSMUA_Achr3P07000_001	Banana	nucleus	33.43	28.78
TraesCS3A01G372100.2	Wheat	nucleus	32.28	28.64
GSMUA_Achr10P...	Banana	nucleus	21.61	28.09
KRH26633	Soybean	mitochondrion	32.28	17.39

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	InterPro:ABI5	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0045893	EnsemblPlantsGene:GSMUA_Achr8G07740_001	EnsemblPlants:GSMUA_Achr8P07740_001	EnsemblPlants:GSMUA_Achr8T07740_001	InterPro:IPR004827	UniProt:M0TNH7
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF217	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000296476B	InterPro:bZIP	SEG:seg	:	:

Description

Protein ABSCISIC ACID-INSENSITIVE 5 [Source:GMGC_GENE;Acc:GSMUA_Achr8G07740_001]

Coordinates

chr8:+:5179959..5181420

Molecular Weight (calculated)

37401.1 Da

IEP (calculated)

9.377

GRAVY (calculated)

-0.616

Length

347 amino acids

Sequence
(BLAST)

001: MASLSESRNM TLEDAEVTSE HRGPEPSRRQ LIPLEDRDTV AARELDLGFP LMRQNTIYSL TLDEIQNAVC EPGKTFGSMN MDEFLTNIWN APPLRRQGSL
101: TLPAPLSRKT VDEVWAEIHR DVALRSQHVE RASQEGAGSA ARQPTFGEMT LEDFLIKAGV VREGYGGGPP GAPSPHQQPQ GLGSAAGVGN GGYSVGNGFG
201: GRVGNGYAAA AAVGSPASPV SSEGIGGGQV DNTVAGYVAD GPRVGGGGGR KRPTDGAAVD KVVERRQRRM IKNRESAARS RARKQAYTVE LEAELNQLKE
301: DNARLREEQG RVMALRKQLL LESMSEQARI NVQKAARKLR RCNSSTW

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.