Factsheet for Os01t0859300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

nucleus: 16977424

gfp PMID: 16977424 doi

MJ Chae, JS Lee, MH Nam, K Cho, JY Hong, SA Yi, SC Suh, IS Yoon

Cell and Genetics Division, National Institute of Agricultural Biotechnology, Suwon, 441-707, Republic of Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0214200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	Os03t0214200-01	AT1G13740.1	18484180
AT3G44460.1	Os03t0214200-01	AT1G69260.1	18484180
AT3G44460.1	Os03t0214200-01	AT3G02140.1	18484180
AT3G44460.1	Os03t0214200-01	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G364900.1	Wheat	nucleus	68.11	56.41
TraesCS3B01G404200.1	Wheat	nucleus	66.87	55.38
TraesCS3B01G404600.1	Wheat	nucleus	66.25	55.3
TraesCS3A01G371800.1	Wheat	nucleus	66.87	55.24
TraesCS3B01G404400.1	Wheat	nucleus	65.63	54.22
TraesCS3B01G404300.1	Wheat	nucleus	65.63	54.22
TraesCS3D01G365500.1	Wheat	nucleus	63.78	53.79
KXG33733	Sorghum	nucleus	68.11	53.53
TraesCS3B01G404500.1	Wheat	nucleus	64.71	53.45
Zm00001d012296_P001	Maize	nucleus	66.56	52.18
TraesCS3D01G365000.1	Wheat	nucleus	63.16	51.52
TraesCS3A01G372000.1	Wheat	nucleus	60.99	51.44
TraesCS3A01G371900.3	Wheat	nucleus	60.06	50.79
TraesCS3A01G372200.1	Wheat	nucleus	59.44	50.26
TraesCS3A01G372100.2	Wheat	nucleus	59.13	48.85
HORVU3Hr1G084360.2	Barley	nucleus	63.47	48.46
Zm00001d042779_P001	Maize	nucleus	56.66	47.78
Os06t0211200-01	Rice	nucleus	33.13	33.02
Os08t0472000-01	Rice	nucleus	32.51	33.02
GSMUA_Achr8P07740_001	Banana	nucleus	34.98	32.56
KRG96191	Soybean	nucleus	37.77	31.52
CDX84141	Canola	nucleus	38.39	31.47
GSMUA_Achr3P22710_001	Banana	nucleus	34.06	31.34
CDX75056	Canola	nucleus	38.7	31.33
VIT_08s0007g03420.t01	Wine grape	nucleus	38.39	31.0
VIT_06s0080g00340.t01	Wine grape	nucleus	30.34	30.25
Os02t0766700-01	Rice	nucleus	33.13	29.97
AT3G44460.1	Thale cress	nucleus	30.65	29.91
Bra017251.1-P	Field mustard	nucleus	36.53	29.8
KRH22688	Soybean	nucleus	30.96	29.76
Os05t0489700-01	Rice	nucleus	30.65	29.55
Solyc09g009490.2.1	Tomato	nucleus	38.7	29.34
CDY43738	Canola	nucleus	36.53	29.21
PGSC0003DMT400006851	Potato	nucleus	38.7	29.21
CDY10500	Canola	nucleus	30.96	28.9
Bra019436.1-P	Field mustard	nucleus	30.03	28.87
Bra005287.1-P	Field mustard	nucleus	39.01	28.77
KRH37750	Soybean	nucleus	18.58	28.44
CDY08701	Canola	nucleus	30.34	28.32
Os09t0456200-01	Rice	nucleus	32.82	28.19
KRH32737	Soybean	nucleus	38.7	27.96
AT2G36270.3	Thale cress	nucleus	38.39	27.93
Os03t0322700-00	Rice	nucleus	21.05	27.87
Os07t0686100-01	Rice	nucleus	23.53	27.74
Os01t0813100-00	Rice	nucleus	28.79	26.88
KRH20056	Soybean	nucleus	39.32	25.71
Os01t0867300-01	Rice	nucleus	20.74	25.19
Os05t0437700-01	Rice	plastid	19.2	25.1
KRH26633	Soybean	mitochondrion	29.72	14.91

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009409	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009737	GO:GO:0009987	GO:GO:0010152	GO:GO:0043565	InterPro:IPR004827	EnsemblPlantsGene:Os01g0859300
EnsemblPlants:Os01t0859300-01	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF187
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0000DD8E08	InterPro:bZIP	SEG:seg	:

Description

ABA INSENSITIVE 5Similar to ABA response element binding factor (Fragment). (Os01t0859300-01)

Coordinates

chr1:+:37174784..37176384

Molecular Weight (calculated)

34473.4 Da

IEP (calculated)

7.808

GRAVY (calculated)

-0.466

Length

323 amino acids

Sequence
(BLAST)

001: SMNMDEFVAN IWNAEEFQAT TGGCKGAMEE AKVVDSGSGS GDAGGSGLCR QGSFSLPLPL CQKTVEEVWT EINQAPAHTS APASALQPHA GSGGVAANDR
101: QVTLGEMTLE DFLVKAGVVR GSFTGQAAMG SGMVNGPVNP MQQGQGGPMM FPVGPVNAMY PVMGDGMGYP GGYNGMAIVP PPPPAQGAMV VVSPGSSDGM
201: SAMTHADMMN CIGNGMMIEN GTRKRPHRED GCAEKTVERR QRRMIKNRES AARSRARKQA YTVELEAELN YLKQENARLK EAEKTVLLTK KQMLVEKMME
301: QSKEKMNANR GGSQLRRSGS CMW

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.