Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G372000.1 | Wheat | nucleus | 90.05 | 89.82 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 88.74 | 88.74 |
| TraesCS3A01G372100.2 | Wheat | nucleus | 89.01 | 86.96 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 81.41 | 79.54 |
| TraesCS3D01G365000.1 | Wheat | nucleus | 81.41 | 78.54 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 79.32 | 77.49 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 78.53 | 76.73 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 78.53 | 76.73 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 72.25 | 65.25 |
| Os01t0859300-01 | Rice | nucleus | 50.26 | 59.44 |
| KXG33733 | Sorghum | nucleus | 57.33 | 53.28 |
| Zm00001d012296_P001 | Maize | nucleus | 55.5 | 51.46 |
| Zm00001d042779_P001 | Maize | nucleus | 47.38 | 47.26 |
| CDX75056 | Canola | nucleus | 34.55 | 33.08 |
| KRG96191 | Soybean | nucleus | 33.25 | 32.82 |
| CDX84141 | Canola | nucleus | 33.77 | 32.74 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 27.75 | 32.72 |
| KRH22688 | Soybean | nucleus | 28.53 | 32.44 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 28.8 | 31.7 |
| Bra017251.1-P | Field mustard | nucleus | 32.72 | 31.57 |
| CDY43738 | Canola | nucleus | 32.98 | 31.19 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 28.53 | 31.05 |
| AT3G44460.1 | Thale cress | nucleus | 26.7 | 30.82 |
| TraesCS4A01G128900.1 | Wheat | nucleus | 18.06 | 30.67 |
| Bra005287.1-P | Field mustard | nucleus | 35.08 | 30.59 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 27.23 | 30.32 |
| TraesCS1A01G306300.1 | Wheat | nucleus | 25.65 | 30.25 |
| AT2G36270.3 | Thale cress | nucleus | 35.08 | 30.18 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 19.9 | 30.04 |
| VIT_08s0007g03420.t01 | Wine grape | nucleus | 31.41 | 30.0 |
| TraesCS3A01G337200.1 | Wheat | nucleus | 26.44 | 29.88 |
| PGSC0003DMT400006851 | Potato | nucleus | 33.25 | 29.67 |
| Solyc09g009490.2.1 | Tomato | nucleus | 32.98 | 29.58 |
| TraesCS2A01G099400.1 | Wheat | nucleus | 21.2 | 29.56 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 26.96 | 29.43 |
| CDY10500 | Canola | nucleus | 26.44 | 29.19 |
| Bra019436.1-P | Field mustard | nucleus | 25.65 | 29.17 |
| KRH32737 | Soybean | nucleus | 34.03 | 29.08 |
| CDY08701 | Canola | nucleus | 25.92 | 28.61 |
| KRH37750 | Soybean | nucleus | 15.71 | 28.44 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 19.11 | 28.4 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 26.7 | 27.72 |
| KRH20056 | Soybean | nucleus | 35.08 | 27.13 |
| TraesCS5A01G141500.1 | Wheat | nucleus | 21.2 | 25.88 |
| KRH26633 | Soybean | mitochondrion | 27.49 | 16.3 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G372200.1 | EnsemblPlantsGene:TraesCS3A01G372200 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF187 | PFAM:PF00170 | PFscan:PS50217 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14707 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr3A:+:622899568..622901200
Molecular Weight (calculated)
41862.0 Da
IEP (calculated)
5.496
GRAVY (calculated)
-0.526
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKMSKDVN FSEEEVTSHP RVLEGEEQTV APARQSSIFP PTLDELQYSM CEARHNFGSM NMDEFMSNIW NAKEFQAATY GVLVGMEVAP VVAVDGGRGG
101: EDAGGSNLAR QESFSLPPPL CRKMVEEVWA EINRETRPVH SQPQSARPSP LIPVEPPAGN GGGVAANEQW GTLGEMTLEQ FLVKVGVVWG SGTGGQEPVP
201: VGMVHGQMNP TPANGMFQVM GDGMVFIPNG YIGMVVVPPP LPPQGGVGIV SPGSSYGRST MTEVDMMNCM GDRVMMENSG TRKRGAPEDQ SCERSIERRH
301: HRMIKNRESA TQSRGWKQAY TKELEAELNH LKEENSHLKD EEKTILLTKK QMLVEKVMEQ PKENVNTKKG GALSRRCGSC IW
101: EDAGGSNLAR QESFSLPPPL CRKMVEEVWA EINRETRPVH SQPQSARPSP LIPVEPPAGN GGGVAANEQW GTLGEMTLEQ FLVKVGVVWG SGTGGQEPVP
201: VGMVHGQMNP TPANGMFQVM GDGMVFIPNG YIGMVVVPPP LPPQGGVGIV SPGSSYGRST MTEVDMMNCM GDRVMMENSG TRKRGAPEDQ SCERSIERRH
301: HRMIKNRESA TQSRGWKQAY TKELEAELNH LKEENSHLKD EEKTILLTKK QMLVEKVMEQ PKENVNTKKG GALSRRCGSC IW
001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL
Arabidopsis Description
ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.