Factsheet for HORVU3Hr1G084360.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035770.1
HORVU4Hr1G067930.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	HORVU4Hr1G035770.1	AT1G13740.1	18484180
AT3G44460.1	HORVU4Hr1G067930.1	AT1G13740.1	18484180
AT3G44460.1	HORVU4Hr1G035770.1	AT1G69260.1	18484180
AT3G44460.1	HORVU4Hr1G067930.1	AT1G69260.1	18484180
AT3G44460.1	HORVU4Hr1G035770.1	AT3G02140.1	18484180
AT3G44460.1	HORVU4Hr1G067930.1	AT3G02140.1	18484180
AT3G44460.1	HORVU4Hr1G035770.1	AT3G29575.1	18484180
AT3G44460.1	HORVU4Hr1G067930.1	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G404600.1	Wheat	nucleus	75.65	82.69
TraesCS3D01G364900.1	Wheat	nucleus	75.89	82.31
TraesCS3A01G371800.1	Wheat	nucleus	75.41	81.59
TraesCS3B01G404200.1	Wheat	nucleus	74.7	81.03
TraesCS3B01G404500.1	Wheat	nucleus	73.52	79.54
TraesCS3B01G404400.1	Wheat	nucleus	73.05	79.03
TraesCS3B01G404300.1	Wheat	nucleus	73.05	79.03
TraesCS3D01G365000.1	Wheat	nucleus	69.98	74.75
TraesCS3D01G365500.1	Wheat	nucleus	67.14	74.15
TraesCS3A01G371900.3	Wheat	nucleus	66.43	73.56
TraesCS3A01G372000.1	Wheat	nucleus	65.96	72.85
TraesCS3A01G372200.1	Wheat	nucleus	65.25	72.25
TraesCS3A01G372100.2	Wheat	nucleus	65.72	71.1
Os01t0859300-01	Rice	nucleus	48.46	63.47
KXG33733	Sorghum	nucleus	56.03	57.66
Zm00001d012296_P001	Maize	nucleus	55.08	56.55
Zm00001d042779_P001	Maize	nucleus	47.04	51.96
HORVU2Hr1G017020.2	Barley	nucleus	9.93	37.5
VIT_06s0080g00340.t01	Wine grape	nucleus	27.66	36.11
GSMUA_Achr8P07740_001	Banana	nucleus	29.31	35.73
HORVU7Hr1G035500.2	Barley	nucleus	27.9	35.44
KRG96191	Soybean	nucleus	32.39	35.4
CDX75056	Canola	nucleus	33.33	35.34
CDX84141	Canola	nucleus	32.86	35.28
GSMUA_Achr3P22710_001	Banana	nucleus	28.84	34.76
KRH22688	Soybean	nucleus	27.42	34.52
AT3G44460.1	Thale cress	nucleus	26.95	34.44
Bra017251.1-P	Field mustard	nucleus	31.91	34.09
CDY43738	Canola	nucleus	32.15	33.66
HORVU6Hr1G080670.1	Barley	nucleus	28.13	33.33
Bra019436.1-P	Field mustard	nucleus	26.48	33.33
Bra005287.1-P	Field mustard	nucleus	34.28	33.1
CDY10500	Canola	nucleus	26.95	32.95
HORVU1Hr1G068760.1	Barley	nucleus	25.77	32.93
VIT_08s0007g03420.t01	Wine grape	nucleus	30.97	32.75
Solyc09g009490.2.1	Tomato	nucleus	32.86	32.63
PGSC0003DMT400006851	Potato	nucleus	32.86	32.48
CDY08701	Canola	nucleus	26.48	32.37
AT2G36270.3	Thale cress	nucleus	33.81	32.21
HORVU0Hr1G023640.4	Barley	nucleus	25.77	31.23
HORVU5Hr1G068230.1	Barley	nucleus	26.95	31.06
KRH37750	Soybean	nucleus	15.37	30.81
HORVU3Hr1G083250.2	Barley	nucleus	16.08	30.77
HORVU3Hr1G079640.5	Barley	nucleus	24.35	30.56
KRH32737	Soybean	nucleus	31.91	30.2
HORVU5Hr1G045180.1	Barley	nucleus	21.51	29.07
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	16.78	28.29
KRH20056	Soybean	nucleus	32.62	27.94
KRH26633	Soybean	mitochondrion	26.48	17.39

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287M0L1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009409	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009737	GO:GO:0009987	GO:GO:0010152	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G084360
EnsemblPlants:HORVU3Hr1G084360.2	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF187	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B48202E	InterPro:bZIP	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:607244129..607247713

Molecular Weight (calculated)

44770.0 Da

IEP (calculated)

4.911

GRAVY (calculated)

-0.511

Length

423 amino acids

Sequence
(BLAST)

001: MASEMSKDVK FSDEEVTSHP RVGEGEEQTV GPARQSSIFA LTLDELQNSV CNPGRNFGSM NMDEFMSNIW NAEEFLAATG GCLVGMEEVP VVGGGGSGGG
101: GGDAGGSTLC RQGSFSLPPP LCRKTVEEVW AEINREPRPV HAQPQAARPS PQPPVQPPAG NGGGAVAANG RQGTLGEMTL EQFLVKAGVV RGSVAGGQAP
201: MPGGMVHGQM NPMQQGQQPG PMMYQMAPAN GMFPVMGDGM GFVPNGYAGM AVVPPPPPSQ GGVGIVSPGS SDGRSAMTQA DMVNCMADGA MMENGGARKR
301: GAPGDQSCER SIERRHRRMI KNRESAARSR ARKQAYTVEL EAELNHLKEE NARLKAEEED DSADQETNAG GEDDGTVQGE RERQERWRTV AALRQLQLVN
401: GDLPFILHGG RWTRACILAV LCV

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.