Factsheet for HORVU3Hr1G079640.5

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G337200.1	Wheat	nucleus	88.43	88.17
TraesCS3D01G330300.1	Wheat	nucleus	86.65	86.65
TraesCS3B01G368300.1	Wheat	nucleus	85.46	83.97
VIT_04s0069g01150.t01	Wine grape	nucleus	12.76	75.44
EES03785	Sorghum	nucleus	66.77	67.57
Zm00001d043117_P002	Maize	nucleus	62.61	63.36
Os01t0813100-00	Rice	nucleus	63.5	61.85
HORVU1Hr1G068760.1	Barley	nucleus	58.46	59.52
Zm00001d012538_P001	Maize	nucleus	48.07	57.86
GSMUA_AchrUn_...	Banana	nucleus	46.59	57.3
GSMUA_Achr11P...	Banana	nucleus	40.95	56.79
HORVU0Hr1G023640.4	Barley	nucleus	57.57	55.59
VIT_13s0175g00120.t01	Wine grape	nucleus	47.48	49.23
KRH44714	Soybean	nucleus	45.4	47.37
KRH13203	Soybean	nucleus	42.43	47.35
KRH56272	Soybean	nucleus	43.92	46.84
KRH62689	Soybean	nucleus	43.62	46.52
VIT_12s0034g00110.t01	Wine grape	nucleus	12.76	43.43
HORVU5Hr1G045180.1	Barley	nucleus	40.06	43.13
HORVU2Hr1G017020.2	Barley	nucleus	14.24	42.86
HORVU3Hr1G083250.2	Barley	nucleus	20.77	31.67
HORVU7Hr1G035500.2	Barley	nucleus	30.56	30.93
HORVU5Hr1G068230.1	Barley	nucleus	33.53	30.79
HORVU6Hr1G080670.1	Barley	nucleus	28.49	26.89
Solyc01g009510.1.1	Tomato	nucleus	14.54	25.79
HORVU1Hr1G074960.8	Barley	mitochondrion, nucleus, plastid	18.4	24.7
HORVU3Hr1G084360.2	Barley	nucleus	30.56	24.35

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287LUQ4	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU3Hr1G079640	EnsemblPlants:HORVU3Hr1G079640.5	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF234	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B461623	InterPro:bZIP

Description

No Description!

Coordinates

chrchr3H:-:584357437..584358882

Molecular Weight (calculated)

36221.0 Da

IEP (calculated)

8.877

GRAVY (calculated)

-0.557

Length

337 amino acids

Sequence
(BLAST)

001: LCAHPWGVGK CASQPGRGTG GDAGTSQRGQ VQSLARQGSL YSLTLDEVQN HLGEPLQSMN LDELLRTVFP DDLEPDGATT SQYVPSSSLM RQGSITMPTE
101: LSKKTVDEVW KGIQDAPKGS VQGGGRRKRE RQPTLGEMTL EDFLVQAGVV TQGFLKDTGD AGNLGLVGRG ATAAGAADLT SGAQWLGQYQ QQIAAAPIDT
201: PQHGHQIVPA AYMPIQFVPK PLNVVGPGAT LGSAYSDGQS TSPMISPISD SQTPGRKRGV SGDVPNKFVE RRQKRMIKNR ESAARSRARK QAYTNELENK
301: VSRLEEENER LKKQKPLLGG IGTTILCTMD NSTCWFM

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.