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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • plastid 2
  • endoplasmic reticulum 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0069g01150.t01 Wine grape nucleus 15.38 87.72
KRH44714 Soybean nucleus 72.92 73.37
KRH13203 Soybean nucleus 67.38 72.52
GSMUA_Achr11P... Banana nucleus 47.38 63.37
VIT_06s0009g01790.t01 Wine grape nucleus 48.31 63.31
GSMUA_AchrUn_... Banana nucleus 52.92 62.77
GSMUA_Achr8P21560_001 Banana nucleus 44.62 60.92
GSMUA_Achr10P... Banana mitochondrion, nucleus 36.31 58.42
TraesCS1B01G317100.1 Wheat nucleus 55.69 56.21
TraesCS1D01G306000.1 Wheat nucleus 56.31 55.96
TraesCS1A01G306300.1 Wheat nucleus 55.38 55.56
EES03785 Sorghum nucleus 56.62 55.26
EES18419 Sorghum nucleus 55.08 55.25
HORVU1Hr1G068760.1 Barley nucleus 56.0 54.98
GSMUA_Achr6P15970_001 Banana nucleus 32.62 54.64
Zm00001d043117_P002 Maize nucleus 55.08 53.75
HORVU2Hr1G017020.2 Barley nucleus 18.46 53.57
VIT_12s0034g00110.t01 Wine grape nucleus 16.31 53.54
Os05t0489700-01 Rice nucleus 55.08 53.43
TraesCS3D01G330300.1 Wheat nucleus 55.08 53.12
TraesCS3A01G337200.1 Wheat nucleus 55.08 52.96
TraesCS3B01G368300.1 Wheat nucleus 55.08 52.19
TraesCS4D01G177700.1 Wheat nucleus 35.38 51.57
TraesCS4B01G175800.1 Wheat nucleus 35.38 51.11
TraesCS2D01G098700.1 Wheat nucleus 42.77 51.1
Zm00001d010638_P001 Maize nucleus 53.85 50.87
TraesCS4A01G128900.1 Wheat nucleus 35.08 50.67
GSMUA_Achr10P... Banana nucleus 36.31 50.43
TraesCS2A01G099400.1 Wheat nucleus 42.15 50.0
TraesCS2B01G115700.1 Wheat nucleus 41.23 48.91
Zm00001d022550_P001 Maize nucleus 42.46 48.42
HORVU0Hr1G023640.4 Barley nucleus 51.69 48.14
Os07t0686100-01 Rice nucleus 40.31 47.81
HORVU3Hr1G079640.5 Barley nucleus 49.23 47.48
KXG39483 Sorghum nucleus 35.38 47.13
TraesCS5B01G139800.1 Wheat nucleus 44.92 46.65
Os01t0813100-00 Rice nucleus 49.54 46.53
TraesCS5A01G141500.1 Wheat nucleus 44.62 46.33
HORVU5Hr1G045180.1 Barley nucleus 44.31 46.01
Zm00001d012538_P001 Maize nucleus 38.46 44.64
Os03t0322700-00 Rice nucleus 32.62 43.44
OQU90534 Sorghum nucleus 42.46 43.4
TraesCS5D01G150700.1 Wheat nucleus 40.0 41.14
VIT_18s0001g04500.t01 Wine grape nucleus 38.46 40.19
VIT_18s0072g00470.t01 Wine grape nucleus, plastid 26.77 31.64
VIT_12s0055g00420.t01 Wine grape nucleus 28.92 31.44
VIT_03s0063g00310.t01 Wine grape nucleus 39.38 31.3
VIT_18s0001g10450.t01 Wine grape nucleus 42.46 30.87
Solyc01g009510.1.1 Tomato nucleus 17.85 30.53
VIT_06s0080g00340.t01 Wine grape nucleus 30.15 30.25
VIT_08s0007g03420.t01 Wine grape nucleus 35.69 29.0
Protein Annotations
Gene3D:1.20.5.170EntrezGene:100254796wikigene:100254796EntrezGene:100266389wikigene:100266389MapMan:15.5.4.1
ProteinID:CCB62776ProteinID:CCB62776.1ncoils:CoilUniProt:F6I758EMBL:FN596766GO:GO:0003674
GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987InterPro:IPR004827EntrezGene:LOC100254796wikigene:LOC100254796EntrezGene:LOC100266389wikigene:LOC100266389
PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF137SMART:SM00338
SUPFAM:SSF57959UniParc:UPI00019858CAArrayExpress:VIT_13s0175g00120EnsemblPlantsGene:VIT_13s0175g00120EnsemblPlants:VIT_13s0175g00120.t01unigene:Vvi.24690
RefSeq:XP_002265747RefSeq:XP_002265747.1RefSeq:XP_003633507RefSeq:XP_003633507.1InterPro:bZIPSEG:seg
Description
No Description!
Coordinates
chr13:+:15049338..15072969
Molecular Weight (calculated)
35872.7 Da
IEP (calculated)
9.476
GRAVY (calculated)
-0.846
Length
325 amino acids
Sequence
(BLAST)
001: MGIQTMGSQG GGGGGGTGNG KQSQFQPLAR QNSMYSLTLD EVQNQLGDLG KPLTSMNLDE LLKNVWTVEA NNSVGMDAEG AGLSNQSALQ REPSLSLTGA
101: LSKKTVDEVW RDIQGHGKNS EEKKSRERQP TLGEMTLEDF LVKAGVVAEP SDKKIAGTVI GVDPNVGPQF PQQGQWMQYP QPQFPHPQQN MIGVYMPGQP
201: MPQPLPMGPS SVMDVTYPDN QVALSSPLMG ALSDTQAPGR KRVSQEDMIE KTVERRQKRM IKNRESAARS RARKQAYTNE LENKVSRLEE ENERLRKRKE
301: LEKMLPSAPP PEPKYQLRRT SSAPF
Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.