Factsheet for TraesCS5D01G150700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G139800.1	Wheat	nucleus	91.46	92.33
TraesCS5A01G141500.1	Wheat	nucleus	91.46	92.33
HORVU5Hr1G045180.1	Barley	nucleus	88.29	89.14
VIT_04s0069g01150.t01	Wine grape	nucleus	12.03	66.67
GSMUA_Achr11P...	Banana	nucleus	35.44	46.09
GSMUA_AchrUn_...	Banana	nucleus	38.29	44.16
TraesCS1D01G306000.1	Wheat	nucleus	44.94	43.43
TraesCS3D01G330300.1	Wheat	nucleus	43.04	40.36
VIT_13s0175g00120.t01	Wine grape	nucleus	41.14	40.0
TraesCS2D01G098700.1	Wheat	nucleus	34.18	39.71
VIT_12s0034g00110.t01	Wine grape	nucleus	12.34	39.39
KRH56272	Soybean	nucleus	38.92	38.92
KRH62689	Soybean	nucleus	38.61	38.61
TraesCS4D01G177700.1	Wheat	nucleus	25.95	36.77
KRH44714	Soybean	nucleus	37.03	36.22
KRH13203	Soybean	nucleus	32.28	33.77
TraesCS3D01G371900.1	Wheat	nucleus	19.62	24.8
TraesCS1D01G273100.1	Wheat	nucleus	19.3	24.21
TraesCS7D01G171300.1	Wheat	nucleus	26.27	24.06
TraesCS5D01G244500.1	Wheat	nucleus	27.53	23.77
Solyc01g009510.1.1	Tomato	nucleus	13.61	22.63
TraesCS3D01G364900.1	Wheat	nucleus	27.22	22.05
TraesCS6D01G312800.1	Wheat	nucleus	25.0	21.94
TraesCS3D01G365500.1	Wheat	nucleus	24.68	20.37
TraesCS3D01G365000.1	Wheat	nucleus	23.1	18.43

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF137	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS5D01G150700	EnsemblPlants:TraesCS5D01G150700.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr5D:+:239940217..239941946

Molecular Weight (calculated)

35179.6 Da

IEP (calculated)

6.007

GRAVY (calculated)

-0.532

Length

316 amino acids

Sequence
(BLAST)

001: MSSEGGGTAI TGKKRNRAQI QTLVREGSLY NLTLSEVESH LGAPLLSMNL DDFVRSVLPD EKNLPLPNGA GNSGSHSTSA FGLERQGSSI TVPLPLSKKT
101: VDEIWRNIQQ EEESSDDEKR SSGCEAQMSF GEITLEEFLQ RAGIVTGQYQ KDAEELIDLV GTGESAHLMT RVQDFPQGTS AIDAYIVRQS IAQPLSVAIP
201: STMDSIYPDR QMSISSSLEL SDLQSPSHKR MSSQDVVYKV ADRRQKRMIK NRESAARSRA RKQAYTNELE CKLSCLEEEN KRLKREKQSI ALDVLLKYLV
301: HLWYHEAMAA RISIEA

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.