Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G411300.1 | Wheat | nucleus | 94.8 | 94.8 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 92.0 | 89.49 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 77.2 | 87.33 |
| Zm00001d042721_P001 | Maize | nucleus | 71.6 | 68.85 |
| EES03943 | Sorghum | nucleus | 70.0 | 66.79 |
| Os01t0867300-01 | Rice | nucleus | 69.6 | 65.41 |
| TraesCS1D01G273100.1 | Wheat | nucleus | 56.8 | 56.35 |
| Zm00001d012273_P001 | Maize | plastid | 54.0 | 55.33 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 50.4 | 49.22 |
| GSMUA_Achr10P... | Banana | nucleus | 50.0 | 46.82 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 46.4 | 46.77 |
| KRH10463 | Soybean | nucleus | 24.0 | 46.15 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 42.4 | 43.62 |
| KRH43979 | Soybean | nucleus | 27.2 | 42.5 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 45.6 | 41.45 |
| CDY22311 | Canola | nucleus, plastid | 40.0 | 37.59 |
| PGSC0003DMT400076576 | Potato | nucleus | 42.4 | 37.32 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 39.2 | 36.84 |
| CDY54481 | Canola | nucleus | 41.2 | 36.01 |
| Solyc01g104650.2.1 | Tomato | nucleus | 42.4 | 35.69 |
| KRH35126 | Soybean | nucleus | 34.8 | 35.22 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 42.0 | 35.12 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 37.6 | 35.07 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 37.6 | 34.81 |
| CDX89852 | Canola | nucleus, plastid | 37.2 | 34.7 |
| CDY18197 | Canola | nucleus, plastid | 37.2 | 34.57 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 42.0 | 34.09 |
| KRH58352 | Soybean | nucleus | 30.4 | 33.93 |
| TraesCS4D01G177700.1 | Wheat | nucleus | 29.6 | 33.18 |
| AT5G44080.1 | Thale cress | nucleus | 41.6 | 33.02 |
| KRH42235 | Soybean | nucleus, plastid | 31.2 | 32.64 |
| TraesCS2D01G098700.1 | Wheat | nucleus | 32.0 | 29.41 |
| TraesCS3D01G330300.1 | Wheat | nucleus | 33.2 | 24.63 |
| TraesCS1D01G306000.1 | Wheat | nucleus | 32.0 | 24.46 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 30.4 | 22.03 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 29.6 | 20.56 |
| TraesCS3D01G364900.1 | Wheat | nucleus | 30.8 | 19.74 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 28.8 | 19.67 |
| TraesCS5D01G150700.1 | Wheat | nucleus | 24.8 | 19.62 |
| TraesCS3D01G365000.1 | Wheat | nucleus | 29.2 | 18.43 |
| TraesCS3D01G365500.1 | Wheat | nucleus | 26.8 | 17.49 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 |
| GO:GO:0043565 | GO:GO:0045893 | GO:GO:1901002 | GO:GO:1902584 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 |
| EnsemblPlantsGene:TraesCS3D01G371900 | EnsemblPlants:TraesCS3D01G371900.1 | InterPro:bZIP | TIGR:cd14707 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:-:485069490..485072294
Molecular Weight (calculated)
26780.6 Da
IEP (calculated)
8.986
GRAVY (calculated)
-0.727
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMASS SKPSHTASDL ARFAQAAGRP GGGGGGGSGL GSMNVEELLR GIYSDAPTPA HDRPASPPVP PLPAAPRQQA TARRTVDEVW REITGGSGGE
101: EEAAPATAGG AAEMTLEDFL AREDGAVVRG AEEQVAMPTM ALLGGAEGAR GGGRGRKRQL MDPMDRAAMQ RQKRMIKNRE SAARSRERKQ AYIAELESLV
201: TQLEEENAHL SKEQEEANQR RLKELKEKVT PVIIAKTPSQ DLRRTNSMEW
101: EEAAPATAGG AAEMTLEDFL AREDGAVVRG AEEQVAMPTM ALLGGAEGAR GGGRGRKRQL MDPMDRAAMQ RQKRMIKNRE SAARSRERKQ AYIAELESLV
201: TQLEEENAHL SKEQEEANQR RLKELKEKVT PVIIAKTPSQ DLRRTNSMEW
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Arabidopsis Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.