Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH10463 | Soybean | nucleus | 28.23 | 53.85 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 52.02 | 53.09 |
| EES03943 | Sorghum | nucleus | 53.23 | 50.38 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 51.61 | 50.0 |
| Zm00001d042721_P001 | Maize | nucleus | 51.61 | 49.23 |
| KRH43979 | Soybean | nucleus | 31.05 | 48.12 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 47.58 | 47.2 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 41.94 | 47.06 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 47.58 | 46.64 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 47.18 | 46.43 |
| TraesCS1D01G273100.1 | Wheat | nucleus | 47.18 | 46.43 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 46.77 | 46.4 |
| GSMUA_Achr10P... | Banana | nucleus | 49.19 | 45.69 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 47.18 | 45.53 |
| Zm00001d038311_P001 | Maize | nucleus | 45.16 | 44.09 |
| Os01t0867300-01 | Rice | nucleus | 46.77 | 43.61 |
| EES18296 | Sorghum | nucleus, plastid | 46.37 | 43.07 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 46.77 | 42.18 |
| KRH58352 | Soybean | nucleus | 37.9 | 41.96 |
| Os05t0437700-01 | Rice | plastid | 40.73 | 40.89 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 41.13 | 40.64 |
| Zm00001d012273_P001 | Maize | plastid | 39.92 | 40.57 |
| KRH42235 | Soybean | nucleus, plastid | 38.71 | 40.17 |
| VIT_12s0055g00420.t01 | Wine grape | nucleus | 48.39 | 40.13 |
| KRH35126 | Soybean | nucleus | 37.5 | 37.65 |
| Solyc01g104650.2.1 | Tomato | nucleus | 44.76 | 37.37 |
| PGSC0003DMT400076576 | Potato | nucleus | 42.74 | 37.32 |
| CDY54481 | Canola | nucleus | 42.74 | 37.06 |
| CDY22311 | Canola | nucleus, plastid | 39.52 | 36.84 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 39.52 | 36.3 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 38.71 | 36.09 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 43.95 | 35.39 |
| Bra015281.1-P | Field mustard | nucleus, plastid | 37.9 | 35.07 |
| CDY18197 | Canola | nucleus, plastid | 37.9 | 34.94 |
| CDX89852 | Canola | nucleus, plastid | 37.5 | 34.7 |
| AT5G44080.1 | Thale cress | nucleus | 42.34 | 33.33 |
| GSMUA_Achr8P21560_001 | Banana | nucleus | 28.63 | 29.83 |
| GSMUA_Achr11P... | Banana | nucleus | 28.23 | 28.81 |
| GSMUA_Achr2P07520_001 | Banana | nucleus | 24.19 | 27.52 |
| GSMUA_Achr10P... | Banana | nucleus | 25.4 | 26.92 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.44 | 26.64 |
| GSMUA_Achr6P15970_001 | Banana | nucleus | 20.56 | 26.29 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 21.37 | 26.24 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 31.85 | 22.51 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 31.45 | 22.48 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 31.05 | 19.35 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 30.24 | 19.33 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 29.84 | 19.32 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 31.05 | 19.11 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 30.24 | 18.43 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 29.84 | 18.36 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G08900_001 |
| EnsemblPlants:GSMUA_Achr9P08900_001 | EnsemblPlants:GSMUA_Achr9T08900_001 | InterPro:IPR004827 | UniProt:M0TYP9 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF175 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002951A51 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
Putative bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G08900_001]
Coordinates
chr9:-:5744435..5750410
Molecular Weight (calculated)
26582.7 Da
IEP (calculated)
8.435
GRAVY (calculated)
-0.497
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSRVMPSS SSAANSDLAR QPPSMYPLAA AADPPPSSAS GDDPAGNLGS TAMDDLLRSF YCEAEAPPPL PAREAAAGGK MAEQVLKEVA AAGRSVAGVD
101: GSAAAGYGEM TLEDFLARAG AQEQLLMVEN PILGFGNGVE GGGSGGVGGG GRGWKRPMVD SVDKATLQRQ KRMIKNRESA ARSRERKQAY TVELESLVRR
201: LEVENASLLR EQEEHYKMRL KQLMENLIPV TEMKKPPRIL RRTHSMQW
101: GSAAAGYGEM TLEDFLARAG AQEQLLMVEN PILGFGNGVE GGGSGGVGGG GRGWKRPMVD SVDKATLQRQ KRMIKNRESA ARSRERKQAY TVELESLVRR
201: LEVENASLLR EQEEHYKMRL KQLMENLIPV TEMKKPPRIL RRTHSMQW
001: MASFKLMSSS NSDLSRRNSS SASSSPSIRS SHHLRPNPHA DHSRISFAYG GGVNDYTFAS DSKPFEMAID VDRSIGDRNS VNNGKSVDDV WKEIVSGEQK
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
101: TIMMKEEEPE DIMTLEDFLA KAEMDEGASD EIDVKIPTER LNNDGSYTFD FPMQRHSSFQ MVEGSMGGGV TRGKRGRVMM EAMDKAAAQR QKRMIKNRES
201: AARSRERKQA YQVELETLAA KLEEENEQLL KEIEESTKER YKKLMEVLIP VDEKPRPPSR PLSRSHSLEW
Arabidopsis Description
GBF4G-box-binding factor 4 [Source:UniProtKB/Swiss-Prot;Acc:P42777]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.