Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22311 | Canola | nucleus, plastid | 68.57 | 81.2 |
| Bra033719.1-P | Field mustard | nucleus, plastid | 68.25 | 80.83 |
| CDY54481 | Canola | nucleus | 71.75 | 79.02 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 48.57 | 56.67 |
| VIT_18s0072g00470.t01 | Wine grape | nucleus, plastid | 45.08 | 51.64 |
| KRH35126 | Soybean | nucleus | 38.1 | 48.58 |
| Solyc04g071510.2.1 | Tomato | nucleus, plastid | 44.76 | 45.78 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 33.33 | 42.34 |
| TraesCS3D01G371900.1 | Wheat | nucleus | 33.02 | 41.6 |
| HORVU3Hr1G083250.2 | Barley | nucleus | 28.57 | 40.72 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 32.06 | 40.4 |
| TraesCS3A01G378700.1 | Wheat | nucleus | 32.38 | 39.69 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 32.06 | 39.45 |
| EES03943 | Sorghum | nucleus | 32.38 | 38.93 |
| Zm00001d042721_P001 | Maize | nucleus | 32.06 | 38.85 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 29.84 | 38.68 |
| Os01t0867300-01 | Rice | nucleus | 30.79 | 36.47 |
| TraesCS1D01G273100.1 | Wheat | nucleus | 28.89 | 36.11 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 28.89 | 36.11 |
| TraesCS1A01G273000.1 | Wheat | nucleus | 28.89 | 35.97 |
| GSMUA_Achr10P... | Banana | nucleus | 30.16 | 35.58 |
| Zm00001d038311_P001 | Maize | nucleus | 27.62 | 34.25 |
| Zm00001d012273_P001 | Maize | plastid | 26.03 | 33.61 |
| EES18296 | Sorghum | nucleus, plastid | 28.25 | 33.33 |
| Os05t0437700-01 | Rice | plastid | 26.03 | 33.2 |
| HORVU1Hr1G074960.8 | Barley | mitochondrion, nucleus, plastid | 25.4 | 31.87 |
| AT2G41070.4 | Thale cress | nucleus | 24.76 | 28.78 |
| AT3G56850.1 | Thale cress | nucleus | 24.76 | 26.26 |
| AT3G44460.1 | Thale cress | nucleus | 22.86 | 21.75 |
| AT1G45249.6 | Thale cress | nucleus | 26.03 | 19.03 |
| AT2G36270.3 | Thale cress | nucleus | 26.35 | 18.69 |
| AT3G19290.3 | Thale cress | nucleus | 24.13 | 17.59 |
| AT1G49720.2 | Thale cress | nucleus | 21.59 | 16.87 |
| AT4G34000.2 | Thale cress | nucleus | 24.13 | 16.74 |
| AT5G42910.1 | Thale cress | nucleus | 19.05 | 16.22 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:834431 | ProteinID:AED95056.1 | ArrayExpress:AT5G44080 | EnsemblPlantsGene:AT5G44080 |
| RefSeq:AT5G44080 | TAIR:AT5G44080 | RefSeq:AT5G44080-TAIR-G | EnsemblPlants:AT5G44080.1 | TAIR:AT5G44080.1 | EMBL:AY072075 |
| EMBL:AY096660 | ProteinID:BAB09068.1 | EMBL:BN000023 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | RefSeq:NP_199221.1 | PFAM:PF00170 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF184 | UniProt:Q9FNB9 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI00000A7627 | InterPro:bZIP | SEG:seg | : | : | : |
Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
Coordinates
chr5:-:17737874..17739949
Molecular Weight (calculated)
34953.1 Da
IEP (calculated)
5.203
GRAVY (calculated)
-0.671
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.