Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10500 | Canola | nucleus | 82.48 | 78.9 |
| Bra019436.1-P | Field mustard | nucleus | 79.76 | 78.57 |
| CDY08701 | Canola | nucleus | 80.97 | 77.46 |
| KRH22688 | Soybean | nucleus | 43.2 | 42.56 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 36.56 | 37.35 |
| AT2G41070.4 | Thale cress | nucleus | 30.21 | 36.9 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 35.95 | 34.29 |
| KRH37750 | Soybean | nucleus | 21.75 | 34.12 |
| AT3G56850.1 | Thale cress | nucleus | 30.21 | 33.67 |
| Solyc09g009490.2.1 | Tomato | nucleus | 40.48 | 31.46 |
| PGSC0003DMT400006851 | Potato | nucleus | 40.48 | 31.31 |
| Os01t0859300-01 | Rice | nucleus | 29.91 | 30.65 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 32.02 | 30.2 |
| TraesCS3D01G364900.1 | Wheat | nucleus | 35.35 | 30.0 |
| TraesCS3A01G371800.1 | Wheat | nucleus | 34.74 | 29.41 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 34.74 | 29.41 |
| TraesCS3B01G404600.1 | Wheat | nucleus | 34.14 | 29.2 |
| AT2G36270.3 | Thale cress | nucleus | 38.67 | 28.83 |
| TraesCS3B01G404200.1 | Wheat | nucleus | 33.84 | 28.72 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 33.84 | 28.64 |
| Zm00001d012296_P001 | Maize | nucleus | 35.65 | 28.64 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 33.23 | 28.13 |
| KXG33733 | Sorghum | nucleus | 34.74 | 27.98 |
| TraesCS3A01G371900.3 | Wheat | nucleus | 31.42 | 27.23 |
| TraesCS3A01G372000.1 | Wheat | nucleus | 31.42 | 27.15 |
| AT1G49720.2 | Thale cress | nucleus | 32.93 | 27.05 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 34.44 | 26.95 |
| TraesCS3A01G372200.1 | Wheat | nucleus | 30.82 | 26.7 |
| AT1G45249.6 | Thale cress | nucleus | 34.44 | 26.45 |
| TraesCS3D01G365500.1 | Wheat | nucleus | 30.51 | 26.37 |
| Zm00001d042779_P001 | Maize | nucleus | 30.21 | 26.11 |
| TraesCS3A01G372100.2 | Wheat | nucleus | 30.51 | 25.83 |
| TraesCS3D01G365000.1 | Wheat | nucleus | 30.82 | 25.76 |
| AT4G34000.2 | Thale cress | nucleus | 34.74 | 25.33 |
| AT3G19290.3 | Thale cress | nucleus | 32.93 | 25.23 |
| AT1G03970.1 | Thale cress | nucleus, plastid | 19.34 | 23.7 |
| AT5G44080.1 | Thale cress | nucleus | 21.75 | 22.86 |
| AT5G42910.1 | Thale cress | nucleus | 25.38 | 22.7 |
| KRH26633 | Soybean | mitochondrion | 41.69 | 21.43 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:823571 | ProteinID:AEE77905.1 | EMBL:AF334207 | EMBL:AJ419600 |
| ArrayExpress:AT3G44460 | EnsemblPlantsGene:AT3G44460 | RefSeq:AT3G44460 | TAIR:AT3G44460 | RefSeq:AT3G44460-TAIR-G | EnsemblPlants:AT3G44460.1 |
| TAIR:AT3G44460.1 | EMBL:BT002923 | EMBL:BT004342 | ProteinID:CAB88528.1 | ncoils:Coil | Symbol:DPBF2 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0033613 | GO:GO:0045893 | InterPro:IPR004827 |
| RefSeq:NP_566870.1 | PFAM:PF00170 | PO:PO:0020030 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF119 | UniProt:Q8RYD6 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000000BE3F | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
DPBF2ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYD6]
Coordinates
chr3:-:16079432..16081906
Molecular Weight (calculated)
37667.3 Da
IEP (calculated)
6.693
GRAVY (calculated)
-0.858
Length
331 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVFESETSN FHVYNNHEIQ TQPQMQTFLS EEEPVGRQNS ILSLTLDEIQ MKSGKSFGAM NMDEFLANLW TTVEENDNEG GGAHNDGEKP AVLPRQGSLS
101: LPVPLCKKTV DEVWLEIQNG VQQHPPSSNS GQNSAENIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMS SSDFGYNPEF GVGLHCQNQN NYGDNRSVYS
201: ENRPFYSVLG ESSSCMTGNG RSNQYLTGLD AFRIKKRIID GPPEILMERR QRRMIKNRES AARSRARRQA YTVELELELN NLTEENTKLK EIVEENEKKR
301: RQEIISRSKQ VTKEKSGDKL RKIRRMASAG W
101: LPVPLCKKTV DEVWLEIQNG VQQHPPSSNS GQNSAENIRR QQTLGEITLE DFLVKAGVVQ EPLKTTMRMS SSDFGYNPEF GVGLHCQNQN NYGDNRSVYS
201: ENRPFYSVLG ESSSCMTGNG RSNQYLTGLD AFRIKKRIID GPPEILMERR QRRMIKNRES AARSRARRQA YTVELELELN NLTEENTKLK EIVEENEKKR
301: RQEIISRSKQ VTKEKSGDKL RKIRRMASAG W
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.