Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G404200.1 | Wheat | nucleus | 90.18 | 89.49 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 89.41 | 88.49 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 89.15 | 88.24 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 88.11 | 87.21 |
| HORVU3Hr1G084360.2 | Barley | nucleus | 82.69 | 75.65 |
| Os01t0859300-01 | Rice | nucleus | 55.3 | 66.25 |
| KXG33733 | Sorghum | nucleus | 62.53 | 58.88 |
| Zm00001d012296_P001 | Maize | nucleus | 61.76 | 58.01 |
| Zm00001d042779_P001 | Maize | nucleus | 54.01 | 54.57 |
| KRG96191 | Soybean | nucleus | 37.21 | 37.21 |
| CDX75056 | Canola | nucleus | 37.47 | 36.34 |
| CDX84141 | Canola | nucleus | 36.95 | 36.29 |
| VIT_06s0080g00340.t01 | Wine grape | nucleus | 29.97 | 35.8 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 31.78 | 35.45 |
| KRH22688 | Soybean | nucleus | 30.75 | 35.42 |
| Bra017251.1-P | Field mustard | nucleus | 35.66 | 34.85 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 31.27 | 34.47 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 30.23 | 34.41 |
| CDY43738 | Canola | nucleus | 35.92 | 34.41 |
| TraesCS4B01G175800.1 | Wheat | nucleus | 19.9 | 34.22 |
| AT3G44460.1 | Thale cress | nucleus | 29.2 | 34.14 |
| Bra005287.1-P | Field mustard | nucleus | 38.24 | 33.79 |
| VIT_08s0007g03420.t01 | Wine grape | nucleus | 34.88 | 33.75 |
| Bra019436.1-P | Field mustard | nucleus | 29.2 | 33.63 |
| TraesCS1B01G317100.1 | Wheat | nucleus | 27.91 | 33.54 |
| AT2G36270.3 | Thale cress | nucleus | 38.24 | 33.33 |
| PGSC0003DMT400006851 | Potato | nucleus | 36.69 | 33.18 |
| Solyc09g009490.2.1 | Tomato | nucleus | 36.43 | 33.1 |
| CDY10500 | Canola | nucleus | 29.46 | 32.95 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 29.72 | 32.76 |
| CDY08701 | Canola | nucleus | 28.94 | 32.37 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 30.49 | 32.24 |
| TraesCS3B01G368300.1 | Wheat | nucleus | 28.17 | 31.78 |
| TraesCS2B01G115700.1 | Wheat | nucleus | 22.48 | 31.75 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 20.41 | 31.35 |
| KRH32737 | Soybean | nucleus | 36.18 | 31.32 |
| KRH37750 | Soybean | nucleus | 16.54 | 30.33 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 19.12 | 29.6 |
| TraesCS5B01G139800.1 | Wheat | nucleus | 23.51 | 29.07 |
| KRH20056 | Soybean | nucleus | 36.95 | 28.95 |
| KRH26633 | Soybean | mitochondrion | 29.72 | 17.86 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF187 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS3B01G404600 | EnsemblPlants:TraesCS3B01G404600.1 | InterPro:bZIP | TIGR:cd14707 | SEG:seg |
Description
No Description!
Coordinates
chr3B:+:639754240..639755740
Molecular Weight (calculated)
41661.1 Da
IEP (calculated)
7.506
GRAVY (calculated)
-0.486
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MASEMSKDVK FSEEEVTSHP RVLEGEEQTV VAPARQSSIF ALTLDELQYS VCEAGHNFGS MNMDEFMSNI WNAEEFQAAT GGGLVGMEVA PVVGAGGGGG
101: GGDAGGSNLA RQESFSLPPP LCRKTVEEVW AEINREPRPV HAQPQAARPS QQPPVQPPVV ANDRQGTLGE MTLEQFLVKA GVVRGSGTGV QAPMPVGMVH
201: GQMNPVQQGQ QPGPMMYPMA PANGIFQVMG DDMGFIPNGY AGMAVVPPPP PPQGGVGIVS PGSSDGRSAM TQADMMNCMG DVVMMENGGA RKRGAPKDQS
301: RERSIERRHR RMIKNRESAA RSRARKQAYT VELEAELNHL KEENVRLKAE EKTILLTKKK MLVEQSKENV KAKKGGVLLR RCGSCIR
101: GGDAGGSNLA RQESFSLPPP LCRKTVEEVW AEINREPRPV HAQPQAARPS QQPPVQPPVV ANDRQGTLGE MTLEQFLVKA GVVRGSGTGV QAPMPVGMVH
201: GQMNPVQQGQ QPGPMMYPMA PANGIFQVMG DDMGFIPNGY AGMAVVPPPP PPQGGVGIVS PGSSDGRSAM TQADMMNCMG DVVMMENGGA RKRGAPKDQS
301: RERSIERRHR RMIKNRESAA RSRARKQAYT VELEAELNHL KEENVRLKAE EKTILLTKKK MLVEQSKENV KAKKGGVLLR RCGSCIR
001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL
Arabidopsis Description
ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.