CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG94206
KRG94991
KRH01286
KRH45047
KRH57716
KRH64894
KRH70923
KRH75067

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	KRH70923	AT1G13740.1	18484180
AT3G44460.1	KRH75067	AT1G13740.1	18484180
AT3G44460.1	KRH70923	AT1G69260.1	18484180
AT3G44460.1	KRH75067	AT1G69260.1	18484180
AT3G44460.1	KRH01286	AT3G02140.1	18484180
AT3G44460.1	KRH45047	AT3G02140.1	18484180
AT3G44460.1	KRH01286	AT3G29575.1	18484180
AT3G44460.1	KRH45047	AT3G29575.1	18484180
AT3G44460.1	KRG94206	AT3G56850.1	21798944
AT3G44460.1	KRG94991	AT3G56850.1	21798944
AT3G44460.1	KRH57716	AT3G56850.1	21798944
AT3G44460.1	KRH64894	AT3G56850.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH22688	Soybean	nucleus	49.07	94.05
KRH37750	Soybean	nucleus	29.35	89.57
AT3G44460.1	Thale cress	nucleus	21.43	41.69
CDY08701	Canola	nucleus	21.12	39.31
CDY10500	Canola	nucleus	21.12	39.31
Bra019436.1-P	Field mustard	nucleus	20.5	39.29
VIT_06s0080g00340.t01	Wine grape	nucleus	18.01	35.8
KRG96191	Soybean	nucleus	21.12	35.14
KRH10463	Soybean	nucleus	6.99	34.62
Solyc09g009490.2.1	Tomato	nucleus	21.89	33.1
KRH13203	Soybean	nucleus	15.22	32.45
GSMUA_Achr8P07740_001	Banana	nucleus	17.39	32.28
PGSC0003DMT400006851	Potato	nucleus	21.27	32.01
KRH32737	Soybean	nucleus	22.2	31.99
KRG89815	Soybean	nucleus	13.51	31.75
KRH56272	Soybean	nucleus	15.53	31.65
KRH62689	Soybean	nucleus	15.22	31.01
KRH44714	Soybean	nucleus	15.06	30.03
TraesCS3A01G371800.1	Wheat	nucleus	18.17	29.92
TraesCS3B01G404300.1	Wheat	nucleus	18.17	29.92
KRH20056	Soybean	nucleus	22.83	29.76
TraesCS3D01G364900.1	Wheat	nucleus	18.01	29.74
Os01t0859300-01	Rice	nucleus	14.91	29.72
TraesCS3B01G404600.1	Wheat	nucleus	17.86	29.72
TraesCS3B01G404400.1	Wheat	nucleus	18.01	29.67
TraesCS3B01G404200.1	Wheat	nucleus	17.86	29.49
GSMUA_Achr3P22710_001	Banana	nucleus	15.99	29.34
KRG94206	Soybean	nucleus	14.6	29.28
KRH18666	Soybean	nucleus	12.58	29.14
KRH43979	Soybean	nucleus	7.14	28.75
TraesCS3B01G404500.1	Wheat	nucleus	17.24	28.39
KRH57716	Soybean	nucleus	14.29	28.22
KRH64894	Soybean	nucleus	13.82	28.16
KRG94991	Soybean	nucleus	13.98	28.12
TraesCS3A01G372000.1	Wheat	nucleus	16.61	27.94
KXG33733	Sorghum	nucleus	17.7	27.74
TraesCS3A01G371900.3	Wheat	nucleus	16.3	27.49
TraesCS3A01G372200.1	Wheat	nucleus	16.3	27.49
TraesCS3D01G365500.1	Wheat	nucleus	16.3	27.42
Zm00001d012296_P001	Maize	nucleus	17.08	26.7
Zm00001d042779_P001	Maize	nucleus	15.84	26.63
TraesCS3A01G372100.2	Wheat	nucleus	16.15	26.6
HORVU3Hr1G084360.2	Barley	nucleus	17.39	26.48
TraesCS3D01G365000.1	Wheat	nucleus	15.84	25.76
KRH52002	Soybean	cytosol	3.88	25.51
KRH61298	Soybean	nucleus	16.46	25.42
KRH35126	Soybean	nucleus	9.63	25.1
KRH42235	Soybean	nucleus, plastid	9.01	24.27
KRH58352	Soybean	nucleus	8.39	24.11
KRH50289	Soybean	nucleus	15.53	23.58
KRH71134	Soybean	nucleus	15.53	22.78
KRH52003	Soybean	nucleus	11.34	22.19
KRH18840	Soybean	nucleus	7.92	18.89
KRH16634	Soybean	mitochondrion	8.39	18.37
KRH26009	Soybean	nucleus, plastid	3.57	12.43

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02007727	ncoils:Coil
EnsemblPlantsGene:GLYMA_12G184400	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:Hydrolase_4	InterPro:IPR004827	InterPro:IPR029058
UniProt:K7LVQ8	EnsemblPlants:KRH26633	ProteinID:KRH26633	ProteinID:KRH26633.1	PFAM:PF00170	PFAM:PF12146
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	SMART:SM00338	SUPFAM:SSF53474
SUPFAM:SSF57959	UniParc:UPI00029574B9	InterPro:bZIP	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:34559090..34566079

Molecular Weight (calculated)

73571.4 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.522

Length

644 amino acids

Sequence
(BLAST)

001: MKRVKHHLKL LTQIPLVQTQ NICRCFCQGT QLSPNHNGSS DDFPVVSPRI KLRDGRHLAY IERGVPKDIA KYKIVIVHGF GSSKEMNFLA PQELIDELGI
101: YLLQYDRAGY GESDPNPKRS LKSEALDIQE LADQLQLGPQ FYVIGVSMGS YATWSCLKYL PHRLAGLALI APVINYRWPS FPKRLIREDY RRKLVQWCMW
201: LANHWPRLLH WWVTQKWLPS TAVIEKNPAF FNKSDVDILK TIPGFPMLTK DSLREKAVFD TLRHDWRVAF GKWEFDPMKL SNPFPHNTEF RFSLLFLFRL
301: FQELAPLSTH MSLQQPNQEV PLQEPEATFS QLSKQNSILS LTLDEFYCKN GKSLGSMNMD EFLSSIWNSD DNNQVNPSLP TLDEAAKGKS VVATEPTTIS
401: QPLSVPPPIC KKTVDEIWSQ IHKSQPHYNE ANNSLARNEP LLKRQQTLGE MTLEDFLVKA GVVQESSSLF KSSLLYQNQI GNIASNGPLS ASYRFRHVIG
501: TGSSVSCNGL ETQNMLAQNN NLVIKDVTTN GAVEKCPSLG ESSGKGNRKR IIDGPPEVVV ERRQRRMLKN RESAARSRAR RQAYTVELEA ELNLLKEENE
601: KLKQTLADAE RKRKQEISQR KHTTMAQKRT EKLRSMKRPL SASW

Best Arabidopsis Sequence Match ( AT3G44510.3 )
(BLAST)

001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKV NITLYQEDYN PLELFPLYSF RTIILF

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.