Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64894 | Soybean | nucleus | 91.56 | 92.72 |
| KRG94206 | Soybean | nucleus | 69.06 | 68.85 |
| KRH57716 | Soybean | nucleus | 69.06 | 67.79 |
| CDX72108 | Canola | nucleus | 50.94 | 64.94 |
| CDY51261 | Canola | nucleus | 49.06 | 62.8 |
| CDY27189 | Canola | nucleus | 47.81 | 61.94 |
| Bra014668.1-P | Field mustard | nucleus | 43.12 | 60.26 |
| Bra007276.1-P | Field mustard | nucleus | 52.5 | 59.57 |
| CDX67659 | Canola | nucleus | 48.12 | 59.46 |
| Bra007274.1-P | Field mustard | nucleus | 52.19 | 59.22 |
| CDX76014 | Canola | nucleus | 50.0 | 59.04 |
| AT2G41070.4 | Thale cress | nucleus | 48.75 | 57.56 |
| PGSC0003DMT400072260 | Potato | nucleus | 61.88 | 57.06 |
| AT3G56850.1 | Thale cress | nucleus | 52.81 | 56.9 |
| CDY47381 | Canola | nucleus | 51.56 | 56.9 |
| Solyc10g081350.1.1 | Tomato | nucleus | 61.56 | 56.29 |
| PGSC0003DMT400018574 | Potato | nucleus | 55.31 | 55.49 |
| CDY57581 | Canola | nucleus | 46.25 | 54.41 |
| KRH13203 | Soybean | nucleus | 50.94 | 53.97 |
| KRH44714 | Soybean | nucleus | 54.06 | 53.56 |
| KRH62689 | Soybean | nucleus | 52.19 | 52.85 |
| KRH56272 | Soybean | nucleus | 52.19 | 52.85 |
| Bra016953.1-P | Field mustard | nucleus | 44.06 | 52.81 |
| CDY53679 | Canola | nucleus | 45.0 | 52.55 |
| CDY06946 | Canola | nucleus | 45.0 | 52.17 |
| Bra004597.1-P | Field mustard | nucleus | 45.62 | 51.96 |
| CDX79959 | Canola | nucleus | 45.62 | 51.77 |
| Solyc10g076920.1.1 | Tomato | nucleus | 43.75 | 49.47 |
| KRG89815 | Soybean | nucleus | 40.94 | 47.81 |
| KRH18666 | Soybean | nucleus | 38.44 | 44.24 |
| Bra003253.1-P | Field mustard | plastid | 49.69 | 39.45 |
| KRH52002 | Soybean | cytosol | 11.88 | 38.78 |
| KRH10463 | Soybean | nucleus | 15.31 | 37.69 |
| KRH43979 | Soybean | nucleus | 17.19 | 34.38 |
| KRG96191 | Soybean | nucleus | 38.12 | 31.52 |
| KRH16634 | Soybean | mitochondrion | 28.75 | 31.29 |
| KRH50289 | Soybean | nucleus | 40.0 | 30.19 |
| KRH61298 | Soybean | nucleus | 39.06 | 29.98 |
| KRH71134 | Soybean | nucleus | 40.0 | 29.16 |
| KRH58352 | Soybean | nucleus | 20.31 | 29.02 |
| KRH18840 | Soybean | nucleus | 24.38 | 28.89 |
| KRH42235 | Soybean | nucleus, plastid | 20.94 | 28.03 |
| KRH22688 | Soybean | nucleus | 29.38 | 27.98 |
| KRH32737 | Soybean | nucleus | 38.44 | 27.52 |
| KRH37750 | Soybean | nucleus | 16.88 | 25.59 |
| KRH20056 | Soybean | nucleus | 38.75 | 25.1 |
| KRH52003 | Soybean | nucleus | 25.62 | 24.92 |
| KRH35126 | Soybean | nucleus | 19.06 | 24.7 |
| KRH26009 | Soybean | nucleus, plastid | 12.81 | 22.16 |
| KRH26633 | Soybean | mitochondrion | 28.12 | 13.98 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100783666 | MapMan:15.5.4.1 | EMBL:ACUP02012068 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G122800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1N8K2 |
| InterPro:IPR004827 | EnsemblPlants:KRG94991 | ProteinID:KRG94991 | ProteinID:KRG94991.1 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF373 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000233E478 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr19:-:38095143..38099999
Molecular Weight (calculated)
35243.3 Da
IEP (calculated)
6.980
GRAVY (calculated)
-0.819
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGGTTQD QEPKTGSLTR QGSLYNLTLD EVQNQLGNLG KPLGSMNLDE LLKSVWTAES GTDAYMQHGG QVASAGSSLN PQGSLTLSGN LSKKTIDEVW
101: RDMQQNKSVG KERQPTLGEM TLEDFLVKAG VATEPFPNED GAMAMSGVDS QHNTSQHAHW MQYQLTSVQQ QPQQQQHQHQ NQQNSVMLGF SGFMTGHAVQ
201: QPIPIVVNTV LDAGYSEALP SSLMGALSDS QTAGRKRDAS GNVVEKIVER RQKRMIKNRE SAARSRARKQ AYTQELEIKV SQLEEENERL RRQNEIERAL
301: PSAPPPDPKH QLRRTSSAPL
101: RDMQQNKSVG KERQPTLGEM TLEDFLVKAG VATEPFPNED GAMAMSGVDS QHNTSQHAHW MQYQLTSVQQ QPQQQQHQHQ NQQNSVMLGF SGFMTGHAVQ
201: QPIPIVVNTV LDAGYSEALP SSLMGALSDS QTAGRKRDAS GNVVEKIVER RQKRMIKNRE SAARSRARKQ AYTQELEIKV SQLEEENERL RRQNEIERAL
301: PSAPPPDPKH QLRRTSSAPL
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.