Factsheet for Bra014668.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001031.1-P
Bra003649.1-P
Bra004004.1-P
Bra004368.1-P
Bra008355.1-P
Bra012325.1-P
Bra016380.1-P
Bra019706.1-P
Bra025400.1-P
Bra026891.1-P
Bra033105.1-P
Bra035027.1-P
Bra036210.1-P
Bra039157.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G56850.1	Bra019706.1-P	AT1G13740.1	18484180
AT3G56850.1	Bra026891.1-P	AT1G13740.1	18484180
AT3G56850.1	Bra004004.1-P	AT1G69260.1	18484180
AT3G56850.1	Bra004368.1-P	AT1G69260.1	18484180
AT3G56850.1	Bra003649.1-P	AT1G78300.1	21798944
AT3G56850.1	Bra008355.1-P	AT1G78300.1	21798944
AT3G56850.1	Bra012325.1-P	AT1G78300.1	21798944
AT3G56850.1	Bra016380.1-P	AT1G78300.1	21798944
AT3G56850.1	Bra035027.1-P	AT1G78300.1	21798944
AT3G56850.1	Bra001031.1-P	AT3G02140.1	18484180
AT3G56850.1	Bra039157.1-P	AT3G02140.1	18484180
AT3G56850.1	Bra025400.1-P	AT3G29575.1	18484180
AT3G56850.1	Bra033105.1-P	AT3G29575.1	18484180
AT3G56850.1	Bra036210.1-P	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76014	Canola	nucleus	97.38	82.29
CDY47381	Canola	nucleus	95.2	75.17
Bra007274.1-P	Field mustard	nucleus	88.65	71.99
Bra007276.1-P	Field mustard	nucleus	87.77	71.28
AT3G56850.1	Thale cress	nucleus	86.46	66.67
Bra016953.1-P	Field mustard	nucleus	67.69	58.05
Bra004597.1-P	Field mustard	nucleus	67.25	54.8
Bra003253.1-P	Field mustard	plastid	77.73	44.17
KRH64894	Soybean	nucleus	60.7	43.99
KRG94206	Soybean	nucleus	60.7	43.3
KRG94991	Soybean	nucleus	60.26	43.12
KRH57716	Soybean	nucleus	58.08	40.8
PGSC0003DMT400072260	Potato	nucleus	59.39	39.19
PGSC0003DMT400018574	Potato	nucleus	54.15	38.87
Solyc10g081350.1.1	Tomato	nucleus	59.39	38.86
Solyc10g076920.1.1	Tomato	nucleus	36.68	29.68
Bra018800.1-P	Field mustard	nucleus	42.79	26.63
Bra040260.1-P	Field mustard	nucleus	39.74	25.0
Bra019436.1-P	Field mustard	nucleus	36.24	24.7
Bra022409.1-P	Field mustard	nucleus	37.99	24.58
Bra017251.1-P	Field mustard	nucleus	41.48	23.99
Bra033719.1-P	Field mustard	nucleus, plastid	27.51	23.68
Bra001742.1-P	Field mustard	nucleus	36.68	23.66
Bra037533.1-P	Field mustard	nucleus	37.99	22.42
Bra005287.1-P	Field mustard	nucleus	41.48	21.69
Bra015281.1-P	Field mustard	nucleus, plastid	25.33	21.64
Bra011485.1-P	Field mustard	nucleus	35.81	18.68
Bra033649.1-P	Field mustard	nucleus	32.75	18.12
Bra017621.1-P	Field mustard	cytosol	17.9	13.76

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra014668	EnsemblPlants:Bra014668.1	EnsemblPlants:Bra014668.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4DDU9	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF137
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002544774	InterPro:bZIP	SEG:seg	:

Description

AT2G41070 (E=4e-068) EEL, ATBZIP12, DPBF4 | EEL (ENHANCED EM LEVEL); DNA binding / transcription factor

Coordinates

chrA04:+:2110715..2111879

Molecular Weight (calculated)

25489.4 Da

IEP (calculated)

9.655

GRAVY (calculated)

-0.809

Length

229 amino acids

Sequence
(BLAST)

001: MNLDELLKSV CSVDSNGDTT QEGGGGLSRQ GSLTLPRDLS KKTVEEVWKD IQQNTNGGSN NAHKEPTLGE MTLEDLLLKA GVVTETVTGL GQNIPQAGPW
101: VQYHQLPSML QGQSFMPYPV ADMQAMVSQT SLMGGLYDTQ TPGRKRVASG EVVEKTVERK QKRMIKNRES AARSRARKQA YTQELEIKVS RLEEENERLR
201: RQKEVEKILP SAPPPDPKRQ LRRTSSAPF

Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)

001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF

Arabidopsis Description

DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.