Factsheet for Bra037533.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18575	Canola	nucleus	88.14	97.16
CDY58256	Canola	nucleus	93.56	92.84
Bra001742.1-P	Field mustard	nucleus	73.71	80.56
Bra022409.1-P	Field mustard	nucleus	73.2	80.23
AT3G19290.3	Thale cress	nucleus	86.34	77.55
Bra018800.1-P	Field mustard	nucleus	62.37	65.76
VIT_03s0063g00310.t01	Wine grape	nucleus	53.35	50.61
EES07580	Sorghum	nucleus	44.59	50.0
TraesCS6A01G333600.2	Wheat	nucleus	44.85	49.71
TraesCS6B01G364000.1	Wheat	nucleus	44.85	49.57
Zm00001d018178_P001	Maize	nucleus	44.59	49.29
PGSC0003DMT400059040	Potato	nucleus	46.39	49.18
HORVU6Hr1G080670.1	Barley	nucleus	45.1	49.02
Os02t0766700-01	Rice	nucleus	45.1	49.02
Os06t0211200-01	Rice	nucleus	40.46	48.46
TraesCS6D01G312800.1	Wheat	nucleus	44.59	48.06
Zm00001d037170_P001	Maize	nucleus	41.49	47.63
PGSC0003DMT400066603	Potato	nucleus	50.77	47.58
Solyc01g108080.2.1	Tomato	nucleus	50.77	47.58
Os08t0472000-01	Rice	nucleus	38.92	47.48
HORVU7Hr1G035500.2	Barley	nucleus	40.72	47.45
Bra040260.1-P	Field mustard	nucleus	44.33	47.25
TraesCS7B01G075600.1	Wheat	nucleus	40.98	46.76
GSMUA_Achr6P30550_001	Banana	nucleus	47.68	46.48
GSMUA_Achr6P04270_001	Banana	nucleus	45.62	46.21
Zm00001d044940_P002	Maize	nucleus	41.75	46.15
KXG19586	Sorghum	nucleus	41.24	45.98
TraesCS7D01G171300.1	Wheat	nucleus	40.72	45.8
TraesCS7A01G170600.1	Wheat	nucleus	40.46	45.77
KRH50289	Soybean	nucleus	50.0	45.75
EER96850	Sorghum	nucleus	43.04	45.63
TraesCS5A01G237200.2	Wheat	nucleus	42.78	45.11
TraesCS5D01G244500.1	Wheat	nucleus	42.53	45.08
Os09t0456200-01	Rice	nucleus	43.56	44.95
TraesCS5B01G235600.2	Wheat	nucleus	42.27	44.81
HORVU5Hr1G068230.1	Barley	nucleus	42.27	44.69
Solyc11g044560.1.1	Tomato	nucleus	45.62	44.36
OQU80633	Sorghum	nucleus	43.56	44.24
GSMUA_Achr9P27130_001	Banana	nucleus	45.88	44.17
GSMUA_Achr5P24570_001	Banana	nucleus	44.07	44.07
KRH71134	Soybean	nucleus	49.48	43.74
GSMUA_Achr5P05690_001	Banana	nucleus	45.62	43.49
OQU78764	Sorghum	nucleus	34.28	42.63
PGSC0003DMT400015892	Potato	nucleus	45.36	42.51
GSMUA_Achr3P07000_001	Banana	nucleus	43.81	42.18
Solyc10g050210.1.1	Tomato	nucleus	41.75	41.75
Bra011485.1-P	Field mustard	nucleus	45.62	40.32
Bra014668.1-P	Field mustard	nucleus	22.42	37.99
Zm00001d020711_P001	Maize	nucleus	39.18	37.53
Bra016953.1-P	Field mustard	nucleus	25.77	37.45
Zm00001d050018_P007	Maize	nucleus	37.63	37.34
Bra007276.1-P	Field mustard	nucleus	27.06	37.23
Bra007274.1-P	Field mustard	nucleus	27.06	37.23
KXG26981	Sorghum	nucleus	15.72	36.97
Zm00001d031790_P002	Maize	nucleus	33.76	36.69
Bra017621.1-P	Field mustard	cytosol	28.09	36.58
Bra004597.1-P	Field mustard	nucleus	25.52	35.23
Zm00001d005884_P002	Maize	nucleus	25.26	32.13
Bra017251.1-P	Field mustard	nucleus	32.73	32.07
Bra019436.1-P	Field mustard	nucleus	26.29	30.36
Bra033649.1-P	Field mustard	nucleus	31.44	29.47
Bra005287.1-P	Field mustard	nucleus	33.25	29.45
Bra003253.1-P	Field mustard	plastid	26.03	25.06
Bra015281.1-P	Field mustard	nucleus, plastid	15.98	23.13
Bra033719.1-P	Field mustard	nucleus, plastid	15.21	22.18

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra037533	EnsemblPlants:Bra037533.1	EnsemblPlants:Bra037533.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4F8X1	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF158	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002544CAD
InterPro:bZIP	SEG:seg	:	:	:	:

Description

AT3G19290 (E=3e-066) ABF4, AREB2 | ABF4 (ABRE BINDING FACTOR 4); DNA binding / protein binding / transcription activator/ transcription factor

Coordinates

chrA01:-:21695470..21696981

Molecular Weight (calculated)

42291.7 Da

IEP (calculated)

10.214

GRAVY (calculated)

-0.838

Length

388 amino acids

Sequence
(BLAST)

001: MGTHVNFNNL GGGGGGEGSN QMKPTDNAYP LARQSSLYSL TFDELQSTLL GGPGKDFGSM NMDELLKSIW TAEEAQAMTM NPSSTATAVA QPGGGIPLQR
101: QGSLTLPRTI SQKTVDEVWK CLFTKDGNMV GSSGGGSESN APQRQQTLGE ITLEEFLLRA GVVREDNNNN NGFYSNNGGL GFGFGQPNQN NISFNNGTND
201: SMILKQPPHQ QFQQQLQPRQ QLNQPPHPPP HQRMPQTIFP KQANVAFAGA GNNAGNNNNN GLGSFGGGGV TVAATSPGTS SAENNSLSPV PYVLNRGRRS
301: NTGLEKVIER RQRRMIKNRE SAARSRARKQ AYTLELEAEI EKLKKVNQEL QKKQAEMMEM QKNELKESSK QPWGSKRQCL RRTLTGPW

Best Arabidopsis Sequence Match ( AT3G19290.5 )
(BLAST)

001: MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VMPLARQSSV YSLTFDELQN TLGGPGKDFG SMNMDELLKS IWTAEEAQAM AMTSAPAATA VAQPGAGIPP
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W

Arabidopsis Description

ABF4ABRE binding factor 4 [Source:UniProtKB/TrEMBL;Acc:F4JB53]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.