Factsheet for PGSC0003DMT400059040

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g044560.1.1	Tomato	nucleus	94.26	86.47
PGSC0003DMT400015892	Potato	nucleus	67.76	59.9
PGSC0003DMT400066603	Potato	nucleus	67.49	59.66
CDY28083	Canola	nucleus	33.06	51.05
CDX99242	Canola	nucleus	48.63	50.28
CDY18575	Canola	nucleus	47.81	49.72
CDY68227	Canola	nucleus	46.99	49.28
Bra022409.1-P	Field mustard	nucleus	46.99	48.59
CDX92320	Canola	nucleus	46.99	48.45
CDY63041	Canola	nucleus	46.72	48.31
CDX69020	Canola	nucleus	46.17	48.29
VIT_03s0063g00310.t01	Wine grape	nucleus	53.55	47.92
CDY51041	Canola	nucleus	43.17	47.88
Os06t0211200-01	Rice	nucleus	42.35	47.84
Bra001742.1-P	Field mustard	nucleus	45.08	46.48
CDX82302	Canola	nucleus	46.17	46.43
Bra037533.1-P	Field mustard	nucleus	49.18	46.39
EES07580	Sorghum	nucleus	42.9	45.38
CDY58256	Canola	nucleus	48.36	45.27
Bra018800.1-P	Field mustard	nucleus	45.36	45.11
KRH50289	Soybean	nucleus	51.64	44.58
Os02t0766700-01	Rice	nucleus	43.44	44.54
HORVU7Hr1G035500.2	Barley	nucleus	40.44	44.44
Zm00001d037170_P001	Maize	nucleus	40.98	44.38
Os08t0472000-01	Rice	nucleus	38.52	44.34
TraesCS6A01G333600.2	Wheat	nucleus	42.35	44.29
TraesCS6B01G364000.1	Wheat	nucleus	42.35	44.16
Zm00001d018178_P001	Maize	nucleus	42.35	44.16
KXG19586	Sorghum	nucleus	41.53	43.68
Zm00001d044940_P002	Maize	nucleus	41.8	43.59
TraesCS7B01G075600.1	Wheat	nucleus	40.44	43.53
AT3G19290.3	Thale cress	nucleus	51.37	43.52
KRH71134	Soybean	nucleus	51.91	43.28
PGSC0003DMT400020670	Potato	nucleus	53.55	43.27
HORVU6Hr1G080670.1	Barley	nucleus	42.08	43.14
TraesCS6D01G312800.1	Wheat	nucleus	42.35	43.06
CDX72445	Canola	nucleus	48.09	42.93
TraesCS7D01G171300.1	Wheat	nucleus	40.44	42.9
TraesCS7A01G170600.1	Wheat	nucleus	40.16	42.86
GSMUA_Achr5P24570_001	Banana	nucleus	45.36	42.78
GSMUA_Achr5P05690_001	Banana	nucleus	47.54	42.75
GSMUA_Achr9P27130_001	Banana	nucleus	46.99	42.68
OQU80633	Sorghum	nucleus	44.26	42.41
EER96850	Sorghum	nucleus	42.35	42.35
OQU78764	Sorghum	nucleus	36.07	42.31
GSMUA_Achr6P30550_001	Banana	nucleus	45.9	42.21
Os09t0456200-01	Rice	nucleus	42.62	41.49
GSMUA_Achr6P04270_001	Banana	nucleus	43.17	41.25
GSMUA_Achr3P07000_001	Banana	nucleus	45.08	40.94
AT4G34000.2	Thale cress	nucleus	50.0	40.31
TraesCS5A01G237200.2	Wheat	nucleus	40.44	40.22
HORVU5Hr1G068230.1	Barley	nucleus	40.16	40.05
AT1G49720.2	Thale cress	nucleus	43.99	39.95
TraesCS5D01G244500.1	Wheat	nucleus	39.62	39.62
TraesCS5B01G235600.2	Wheat	nucleus	39.34	39.34
PGSC0003DMT400058469	Potato	nucleus	15.03	37.67
Bra011485.1-P	Field mustard	nucleus	44.81	37.36
Zm00001d031790_P002	Maize	nucleus	35.52	36.41
Zm00001d050018_P007	Maize	nucleus	38.52	36.06
KXG26981	Sorghum	nucleus	15.85	35.15
Zm00001d020711_P001	Maize	nucleus	38.8	35.06
Bra017621.1-P	Field mustard	cytosol	26.78	32.89
PGSC0003DMT400072260	Potato	nucleus	30.87	32.56
PGSC0003DMT400018574	Potato	nucleus	28.14	32.29
Zm00001d005884_P002	Maize	nucleus	25.96	31.15
PGSC0003DMT400006851	Potato	nucleus	35.25	30.14
PGSC0003DMT400076576	Potato	nucleus	21.86	28.17

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:102581652	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	UniProt:M1C3P7	PFAM:PF00170	EnsemblPlantsGene:PGSC0003DMG400022931	PGSC:PGSC0003DMG400022931	EnsemblPlants:PGSC0003DMT400059040
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF158	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI000296C0C1	RefSeq:XP_006352088.1	RefSeq:XP_006352090.1	InterPro:bZIP	SEG:seg	:

Description

Transcription factor BZIP1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022931]

Coordinates

chr11:-:30780806..30784809

Molecular Weight (calculated)

40067.1 Da

IEP (calculated)

9.145

GRAVY (calculated)

-0.621

Length

366 amino acids

Sequence
(BLAST)

001: MGSYLNFKNF ADTSQPESSG NNSNFSLARQ SSIYSFTFDE LQSTCGLGKD FGSMNMDDLL KNIEESQAFP SSAAAGGNLQ RQGSLTLPRT LSQRTVDEVW
101: KDFQKESVIA NDVSGTGGSN FGQRESTLGE MTLEEFLVRA GAVREDMQPA GYSNDVTFAS GFTQPSSSVT IAFQQATQNP GHQIAGNNIF NVVSTTTSST
201: QQPLFPKQTT VEFASPLQLG GSPGTRPPMS NPSANTSSVM QGGVMTMPVK GVSPGNIDTS SLSPSPYACG EGGRGRRSCT SFEKVVERRR KRMIKNRESA
301: ARSRDRKQAY TLELEAEVAK LKEIKQELQK KQAEFIEKQK KQLLEKMNVP WENKLICLRR TVTGPW

Best Arabidopsis Sequence Match ( AT4G34000.2 )
(BLAST)

001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW

Arabidopsis Description

ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.