Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69020 | Canola | nucleus | 97.42 | 97.14 |
| Bra011485.1-P | Field mustard | nucleus | 94.56 | 75.17 |
| CDX72445 | Canola | nucleus | 85.67 | 72.93 |
| AT4G34000.2 | Thale cress | nucleus | 85.1 | 65.42 |
| CDY65560 | Canola | nucleus | 48.42 | 55.96 |
| CDY28083 | Canola | nucleus | 36.96 | 54.43 |
| CDX99242 | Canola | nucleus | 52.44 | 51.69 |
| CDY18575 | Canola | nucleus | 51.86 | 51.42 |
| CDX92320 | Canola | nucleus | 51.86 | 50.99 |
| CDY51041 | Canola | nucleus | 47.56 | 50.3 |
| CDY17109 | Canola | nucleus | 48.14 | 50.15 |
| CDY63041 | Canola | nucleus | 50.43 | 49.72 |
| Os06t0211200-01 | Rice | nucleus | 45.56 | 49.07 |
| EES07580 | Sorghum | nucleus | 47.28 | 47.69 |
| CDX82302 | Canola | nucleus | 49.57 | 47.53 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 45.27 | 47.45 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 55.3 | 47.19 |
| Os02t0766700-01 | Rice | nucleus | 48.14 | 47.06 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 47.28 | 47.01 |
| PGSC0003DMT400059040 | Potato | nucleus | 49.28 | 46.99 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 46.99 | 46.86 |
| Zm00001d037170_P001 | Maize | nucleus | 45.27 | 46.75 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 45.27 | 46.47 |
| Zm00001d018178_P001 | Maize | nucleus | 46.42 | 46.15 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 46.99 | 45.94 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 47.28 | 45.83 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 45.27 | 45.8 |
| Zm00001d044940_P002 | Maize | nucleus | 45.85 | 45.58 |
| CDY58256 | Canola | nucleus | 51.0 | 45.52 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 44.7 | 45.48 |
| KXG19586 | Sorghum | nucleus | 44.99 | 45.11 |
| Os08t0472000-01 | Rice | nucleus | 40.4 | 44.34 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 48.42 | 43.56 |
| Solyc01g108080.2.1 | Tomato | nucleus | 51.58 | 43.48 |
| OQU80633 | Sorghum | nucleus | 47.56 | 43.46 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 47.56 | 43.34 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 49.0 | 42.96 |
| OQU78764 | Sorghum | nucleus | 38.4 | 42.95 |
| PGSC0003DMT400066603 | Potato | nucleus | 50.72 | 42.75 |
| Solyc11g044560.1.1 | Tomato | nucleus | 48.14 | 42.11 |
| KRH50289 | Soybean | nucleus | 51.0 | 41.98 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.42 | 41.94 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 43.84 | 41.8 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 48.71 | 41.77 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 43.84 | 41.58 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 43.55 | 41.53 |
| EER96850 | Sorghum | nucleus | 43.55 | 41.53 |
| Os09t0456200-01 | Rice | nucleus | 44.7 | 41.49 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 43.27 | 41.14 |
| Solyc10g050210.1.1 | Tomato | nucleus | 45.56 | 40.98 |
| CDY27189 | Canola | nucleus | 28.65 | 40.49 |
| CDX72108 | Canola | nucleus | 28.94 | 40.24 |
| PGSC0003DMT400015892 | Potato | nucleus | 47.56 | 40.1 |
| KRH71134 | Soybean | nucleus | 50.43 | 40.09 |
| CDY51261 | Canola | nucleus | 28.65 | 40.0 |
| KXG26981 | Sorghum | nucleus | 18.34 | 38.79 |
| CDX67659 | Canola | nucleus | 28.08 | 37.84 |
| CDY57581 | Canola | nucleus | 28.65 | 36.76 |
| CDY53679 | Canola | nucleus | 28.65 | 36.5 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 42.12 | 36.48 |
| Zm00001d031790_P002 | Maize | nucleus | 37.25 | 36.41 |
| CDY06946 | Canola | nucleus | 28.65 | 36.23 |
| CDX76014 | Canola | nucleus | 28.08 | 36.16 |
| Zm00001d050018_P007 | Maize | nucleus | 40.4 | 36.06 |
| CDY47381 | Canola | nucleus | 29.51 | 35.52 |
| CDX79959 | Canola | nucleus | 27.79 | 34.4 |
| Zm00001d020711_P001 | Maize | nucleus | 39.54 | 34.07 |
| CDX84141 | Canola | nucleus | 34.1 | 30.2 |
| CDY43738 | Canola | nucleus | 34.96 | 30.2 |
| Zm00001d005884_P002 | Maize | nucleus | 26.36 | 30.16 |
| CDY10500 | Canola | nucleus | 29.8 | 30.06 |
| CDX75056 | Canola | nucleus | 34.1 | 29.82 |
| CDY08701 | Canola | nucleus | 29.51 | 29.77 |
| CDX71528 | Canola | nucleus | 30.95 | 27.62 |
| CDY22378 | Canola | nucleus | 30.95 | 27.34 |
| CDY18197 | Canola | nucleus, plastid | 19.2 | 24.91 |
| CDX89852 | Canola | nucleus, plastid | 18.91 | 24.63 |
| CDY54481 | Canola | nucleus | 19.48 | 23.78 |
| CDY22311 | Canola | nucleus, plastid | 18.05 | 23.68 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078JS33 | UniProt:A0A078JS33 | EnsemblPlants:CDY68227 | ProteinID:CDY68227 |
| ProteinID:CDY68227.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00072057001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EEF919 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaAnng26550DBnaAnng26550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS33]
Coordinates
chrLK037018:+:1154..3717
Molecular Weight (calculated)
39030.7 Da
IEP (calculated)
10.117
GRAVY (calculated)
-0.681
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQFNFVDD AKQPALGAGV PLTRQNSVFS LTFDEFQNSW GGGVGKDFGS MNMDELLKNI WTAEESHSIM ANNTREIGVG GGLQRQGSIT LPRTISQKRV
101: DDVWKELMKD DDAGSGGGGA SGVPQRQQTL GEMTLEEFLV RAGVVREEPQ QVERKVHQPQ QLIQKQQDVA FPKQSTIAFS NTVDLVNRSQ PPTQEVKPSV
201: LGVRDRPMNN NNLLQAVDFK TGVTVAAVSP GSQMSPELTP KSNMDASLSP VPYMFGRVRK TGAVLEKVIE RRQKRMIKNR ESAARSRARK QAYTLELEAE
301: VAQLKEQNEE LQRKQVEIIE KQKKQLLEPM RQPWGCKRQC LRRTLTGPW
101: DDVWKELMKD DDAGSGGGGA SGVPQRQQTL GEMTLEEFLV RAGVVREEPQ QVERKVHQPQ QLIQKQQDVA FPKQSTIAFS NTVDLVNRSQ PPTQEVKPSV
201: LGVRDRPMNN NNLLQAVDFK TGVTVAAVSP GSQMSPELTP KSNMDASLSP VPYMFGRVRK TGAVLEKVIE RRQKRMIKNR ESAARSRARK QAYTLELEAE
301: VAQLKEQNEE LQRKQVEIIE KQKKQLLEPM RQPWGCKRQC LRRTLTGPW
001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW
Arabidopsis Description
ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.