CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78764	Sorghum	nucleus	78.8	96.47
Zm00001d031790_P002	Maize	nucleus	74.35	79.55
Os08t0472000-01	Rice	nucleus	65.18	78.3
Zm00001d050018_P007	Maize	nucleus	78.01	76.21
KXG26981	Sorghum	nucleus	30.1	69.7
EER96850	Sorghum	nucleus	60.99	63.66
CDY65560	Canola	nucleus	44.5	56.29
KRH52002	Soybean	cytosol	14.4	56.12
CDY28083	Canola	nucleus	32.2	51.9
CDY17109	Canola	nucleus	45.29	51.64
EES07580	Sorghum	nucleus	45.81	50.58
KXG19586	Sorghum	nucleus	44.5	48.85
GSMUA_Achr6P30550_001	Banana	nucleus	50.79	48.74
Bra022409.1-P	Field mustard	nucleus	45.03	48.59
GSMUA_Achr5P24570_001	Banana	nucleus	49.21	48.45
CDX92320	Canola	nucleus	45.03	48.45
CDX99242	Canola	nucleus	44.76	48.31
CDY18575	Canola	nucleus	44.24	48.01
Bra040260.1-P	Field mustard	nucleus	45.55	47.8
CDY68227	Canola	nucleus	43.46	47.56
GSMUA_Achr6P04270_001	Banana	nucleus	47.64	47.52
CDX69020	Canola	nucleus	43.19	47.14
CDY51041	Canola	nucleus	40.58	46.97
GSMUA_Achr5P05690_001	Banana	nucleus	50.0	46.93
Bra001742.1-P	Field mustard	nucleus	43.19	46.48
CDY63041	Canola	nucleus	42.67	46.05
VIT_03s0063g00310.t01	Wine grape	nucleus	49.21	45.97
CDX82302	Canola	nucleus	43.72	45.88
GSMUA_Achr9P27130_001	Banana	nucleus	48.17	45.66
KRH61298	Soybean	nucleus	49.74	45.56
VIT_18s0001g10450.t01	Wine grape	nucleus	52.09	44.52
PGSC0003DMT400059040	Potato	nucleus	42.41	44.26
Bra037533.1-P	Field mustard	nucleus	44.24	43.56
Bra018800.1-P	Field mustard	nucleus	41.88	43.48
Solyc01g108080.2.1	Tomato	nucleus	47.12	43.48
GSMUA_Achr3P07000_001	Banana	nucleus	45.81	43.42
CDY58256	Canola	nucleus	43.98	42.97
PGSC0003DMT400066603	Potato	nucleus	46.34	42.75
Solyc04g078840.2.1	Tomato	nucleus	49.74	42.51
KRH50289	Soybean	nucleus	47.12	42.45
AT1G45249.6	Thale cress	nucleus	47.12	41.76
PGSC0003DMT400020670	Potato	nucleus	49.21	41.5
Solyc10g050210.1.1	Tomato	nucleus	42.15	41.49
AT3G19290.3	Thale cress	nucleus	46.86	41.44
PGSC0003DMT400015892	Potato	nucleus	44.76	41.3
CDX72445	Canola	nucleus	43.98	40.98
Solyc11g044560.1.1	Tomato	nucleus	42.67	40.85
KRH71134	Soybean	nucleus	46.34	40.32
AT4G34000.2	Thale cress	nucleus	45.81	38.55
AT1G49720.2	Thale cress	nucleus	40.31	38.21
KRH52003	Soybean	nucleus	32.72	37.99
Bra011485.1-P	Field mustard	nucleus	42.67	37.13
EES18419	Sorghum	nucleus	31.15	36.73
EES03785	Sorghum	nucleus	29.84	34.23
KXG39483	Sorghum	nucleus	21.73	34.02
AT5G42910.1	Thale cress	nucleus	32.2	33.24
CDY22378	Canola	nucleus	34.29	33.16
KXG33733	Sorghum	nucleus	35.34	32.85
CDX71528	Canola	nucleus	33.25	32.48
Bra033649.1-P	Field mustard	nucleus	34.03	31.4
Bra017621.1-P	Field mustard	cytosol	24.35	31.21
OQU90534	Sorghum	nucleus	25.39	30.5
EES03943	Sorghum	nucleus	20.42	29.77
EES18296	Sorghum	nucleus, plastid	19.37	27.72

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1Z5RA32	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	EnsemblPlants:OQU80633	ProteinID:OQU80633	ProteinID:OQU80633.1	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF190	SMART:SM00338	EnsemblPlantsGene:SORBI_3007G155900	SUPFAM:SSF57959
UniParc:UPI000B8BAE6F	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:58990694..58996047

Molecular Weight (calculated)

40055.6 Da

IEP (calculated)

6.840

GRAVY (calculated)

-0.362

Length

382 amino acids

Sequence
(BLAST)

001: MDPKDGERMG AAGPGPLSRQ GSIYSLTFDE FQNTLGGMGG GLGKDFGSMN MDELLRSIWT AEESQAIASA SASASASAAG AGAGPVGDGG AALQRQGSLT
101: LPRTLSVKTV DEVWRDFARE GPPGPTAGGA EPQPNRQPTL GEMTLEEFLV RAGVVRDNPA AAAAAAAAAV SAQPVAPRPI QAVNNGASIF FGNFGGANDA
201: GAGAMGFAPV GIGDQAMGNG LMPGVAGMAG GAVTVVSPVD TSVAQLDSMG KGNGDLSSPM APVPYPFEGV IRGRRSGAGV EKVVERRQRR MIKNRESAAR
301: SRARKQAYTM ELEAEVQKLK EQNEELQKKQ EEIMEMQKNQ VLEVISNPYA QKKRCLRRTL TGFGEPKFLL YISDQQSRMY QC

Best Arabidopsis Sequence Match ( AT1G45249.1 )
(BLAST)

001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW

Arabidopsis Description

ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.