Factsheet for Bra040260.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65560	Canola	nucleus	76.92	92.72
CDY17109	Canola	nucleus	82.42	89.55
AT1G45249.6	Thale cress	nucleus	87.36	73.78
Os06t0211200-01	Rice	nucleus	45.88	51.54
Solyc04g078840.2.1	Tomato	nucleus	62.91	51.23
TraesCS6B01G364000.1	Wheat	nucleus	48.63	50.43
PGSC0003DMT400020670	Potato	nucleus	62.64	50.33
TraesCS6A01G333600.2	Wheat	nucleus	48.08	50.0
GSMUA_Achr6P30550_001	Banana	nucleus	53.85	49.25
GSMUA_Achr5P24570_001	Banana	nucleus	52.47	49.23
EES07580	Sorghum	nucleus	46.7	49.13
HORVU7Hr1G035500.2	Barley	nucleus	44.78	48.95
TraesCS6D01G312800.1	Wheat	nucleus	48.35	48.89
HORVU6Hr1G080670.1	Barley	nucleus	47.8	48.74
Os02t0766700-01	Rice	nucleus	47.53	48.46
TraesCS7B01G075600.1	Wheat	nucleus	45.05	48.24
Zm00001d037170_P001	Maize	nucleus	44.78	48.22
GSMUA_Achr9P27130_001	Banana	nucleus	53.02	47.89
TraesCS7D01G171300.1	Wheat	nucleus	45.05	47.54
TraesCS7A01G170600.1	Wheat	nucleus	44.78	47.52
KXG19586	Sorghum	nucleus	45.33	47.41
EER96850	Sorghum	nucleus	47.53	47.27
Zm00001d044940_P002	Maize	nucleus	45.33	47.01
GSMUA_Achr6P04270_001	Banana	nucleus	49.45	47.0
Bra022409.1-P	Field mustard	nucleus	45.6	46.89
Os08t0472000-01	Rice	nucleus	40.93	46.86
Bra001742.1-P	Field mustard	nucleus	45.6	46.76
Zm00001d018178_P001	Maize	nucleus	45.05	46.72
GSMUA_Achr5P05690_001	Banana	nucleus	51.92	46.44
OQU78764	Sorghum	nucleus	39.29	45.83
OQU80633	Sorghum	nucleus	47.8	45.55
Os09t0456200-01	Rice	nucleus	46.98	45.48
TraesCS5B01G235600.2	Wheat	nucleus	45.33	45.08
TraesCS5A01G237200.2	Wheat	nucleus	45.33	44.84
GSMUA_Achr3P07000_001	Banana	nucleus	49.45	44.66
TraesCS5D01G244500.1	Wheat	nucleus	44.78	44.54
Bra037533.1-P	Field mustard	nucleus	47.25	44.33
HORVU5Hr1G068230.1	Barley	nucleus	44.51	44.14
Bra018800.1-P	Field mustard	nucleus	43.68	43.21
KXG26981	Sorghum	nucleus	18.96	41.82
Bra011485.1-P	Field mustard	nucleus	48.9	40.55
Zm00001d031790_P002	Maize	nucleus	39.29	40.06
Bra014668.1-P	Field mustard	nucleus	25.0	39.74
Bra007274.1-P	Field mustard	nucleus	30.49	39.36
Bra007276.1-P	Field mustard	nucleus	30.22	39.01
Zm00001d020711_P001	Maize	nucleus	42.86	38.52
Bra016953.1-P	Field mustard	nucleus	28.02	38.2
Zm00001d050018_P007	Maize	nucleus	40.93	38.11
Bra004597.1-P	Field mustard	nucleus	28.57	37.01
Zm00001d005884_P002	Maize	nucleus	29.4	35.08
Bra017251.1-P	Field mustard	nucleus	37.09	34.09
Bra033649.1-P	Field mustard	nucleus	38.74	34.06
Bra019436.1-P	Field mustard	nucleus	30.49	33.04
Bra017621.1-P	Field mustard	cytosol	26.92	32.89
Bra005287.1-P	Field mustard	nucleus	38.46	31.96
Bra003253.1-P	Field mustard	plastid	29.12	26.3
Bra033719.1-P	Field mustard	nucleus, plastid	16.76	22.93
Bra015281.1-P	Field mustard	nucleus, plastid	15.93	21.64

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra040260	EnsemblPlants:Bra040260.1	EnsemblPlants:Bra040260.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	UniProt:M4FGN2	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF368	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000253EC0F	InterPro:bZIP	SEG:seg

Description

AT1G45249 (E=5e-081) ABF2, AREB1 | ABF2 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2); DNA binding / protein binding / transcription activator/ transcription factor

Coordinates

chrScaffold000193:+:82533..84334

Molecular Weight (calculated)

39046.5 Da

IEP (calculated)

9.877

GRAVY (calculated)

-0.559

Length

364 amino acids

Sequence
(BLAST)

001: MGNEPPGDGG GGALTRQGSI YSLTFDEFQS SLGKDFGSMN MDELLKNIWT AEETQAMAVA ASTSGVIPLA GEGLPLQRQG SLTLPRTLST KTVDQVWKDL
101: AKDGGGGTNL TQSQSQRQQT LGEVTLEEFL VRAGVVREEA QIAAKDANTG FSVQASPQVV PGLMGNLGAE TVNHMQVQGS SLPLNVNGAR STYQQHQPIM
201: PKQPGFGYGT HVGPGIRGGL MGLGDQSLTN NMGLVQGVVG AVSPVTPVSA DGIGKNNGDS SSLSPSPYMF NGVRGRKSGT VEKVVERRQR RMIKNRESAA
301: RSRARKQAYT VELEAEVAKL KEENQELQRK QAKIMEMQKN QEMEMMNIQG GAKKKLRRTE SGPW

Best Arabidopsis Sequence Match ( AT1G45249.1 )
(BLAST)

001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW

Arabidopsis Description

ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.