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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • endoplasmic reticulum 1
  • mitochondrion 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:endoplasmic reticulum
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 12468735
nucleus: 18931143
gfp PMID: 12468735 doi
Y Kagaya, T Hobo, M Murata, A Ban, T Hattori
Center for Molecular Biology and Genetics, Mie University, 1515 Kamihama-cho, Tsu 514-8507, Japan.
gfp PMID: 18931143 doi
Y Xiang, N Tang, H Du, H Ye, L Xiong
National Center of Plant Gene Research , National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07580 Sorghum nucleus 76.47 78.9
Zm00001d018178_P001 Maize nucleus 75.07 76.35
HORVU6Hr1G080670.1 Barley nucleus 75.07 75.07
TraesCS6B01G364000.1 Wheat nucleus 73.39 74.64
TraesCS6A01G333600.2 Wheat nucleus 72.83 74.29
TraesCS6D01G312800.1 Wheat nucleus 74.23 73.61
Os06t0211200-01 Rice nucleus 57.98 63.89
CDY65560 Canola nucleus 46.22 54.64
KRH52002 Soybean cytosol 14.01 51.02
CDY17109 Canola nucleus 47.06 50.15
GSMUA_Achr6P30550_001 Banana nucleus 55.46 49.75
CDY18575 Canola nucleus 49.02 49.72
CDY28083 Canola nucleus 32.77 49.37
Os08t0472000-01 Rice nucleus 43.14 48.43
CDY68227 Canola nucleus 47.06 48.14
CDX69020 Canola nucleus 46.78 47.71
Bra040260.1-P Field mustard nucleus 48.46 47.53
CDX99242 Canola nucleus 47.06 47.46
CDY63041 Canola nucleus 46.78 47.18
CDY51041 Canola nucleus 43.42 46.97
Bra022409.1-P Field mustard nucleus 46.5 46.89
CDX92320 Canola nucleus 46.5 46.76
GSMUA_Achr9P27130_001 Banana nucleus 51.26 45.41
Bra037533.1-P Field mustard nucleus 49.02 45.1
Bra001742.1-P Field mustard nucleus 44.82 45.07
Os09t0456200-01 Rice nucleus 47.34 44.95
CDX82302 Canola nucleus 45.66 44.78
GSMUA_Achr6P04270_001 Banana nucleus 47.9 44.65
GSMUA_Achr5P24570_001 Banana nucleus 48.18 44.33
GSMUA_Achr5P05690_001 Banana nucleus 50.42 44.23
CDY58256 Canola nucleus 48.18 43.99
VIT_18s0001g10450.t01 Wine grape nucleus 54.9 43.85
PGSC0003DMT400059040 Potato nucleus 44.54 43.44
Solyc04g078840.2.1 Tomato nucleus 53.5 42.73
VIT_03s0063g00310.t01 Wine grape nucleus 48.74 42.54
KRH61298 Soybean nucleus 49.58 42.45
Bra018800.1-P Field mustard nucleus 43.7 42.39
PGSC0003DMT400020670 Potato nucleus 53.78 42.38
KRH50289 Soybean nucleus 49.86 41.98
Solyc01g108080.2.1 Tomato nucleus 48.46 41.79
AT1G45249.6 Thale cress nucleus 50.14 41.53
AT3G19290.3 Thale cress nucleus 50.14 41.44
PGSC0003DMT400066603 Potato nucleus 47.62 41.06
KRH71134 Soybean nucleus 50.14 40.77
CDX72445 Canola nucleus 46.78 40.73
GSMUA_Achr3P07000_001 Banana nucleus 45.66 40.45
Solyc10g050210.1.1 Tomato nucleus 43.7 40.21
PGSC0003DMT400015892 Potato nucleus 45.66 39.37
Solyc11g044560.1.1 Tomato nucleus 43.98 39.35
AT4G34000.2 Thale cress nucleus 47.9 37.67
AT1G49720.2 Thale cress nucleus 41.74 36.97
KRH52003 Soybean nucleus 33.61 36.47
Bra011485.1-P Field mustard nucleus 44.82 36.45
Os07t0686100-01 Rice nucleus 27.17 35.4
Os05t0489700-01 Rice nucleus 31.09 33.13
Os01t0859300-01 Rice nucleus 29.97 33.13
Bra017621.1-P Field mustard cytosol 26.61 31.88
AT5G42910.1 Thale cress nucleus 32.77 31.62
Os01t0867300-01 Rice nucleus 22.13 29.7
Os01t0813100-00 Rice nucleus 28.01 28.9
CDX71528 Canola nucleus 31.65 28.9
CDY22378 Canola nucleus 31.93 28.86
Os03t0322700-00 Rice nucleus 19.33 28.28
Bra033649.1-P Field mustard nucleus 31.93 27.54
Os05t0437700-01 Rice plastid 17.93 25.91
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1EntrezGene:4330838EMBL:AK072062ProteinID:BAD17130.1ProteinID:BAD17318.1
ProteinID:BAF10139.1ProteinID:BAS81069.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0006950GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009414GO:GO:0009628GO:GO:0009651
GO:GO:0009719GO:GO:0009738GO:GO:0009987InterPro:IPR004827EnsemblPlantsGene:Os02g0766700EnsemblPlants:Os02t0766700-01
PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF103UniProt:Q6Z312
SMART:SM00338SUPFAM:SSF57959UniParc:UPI000035AE05RefSeq:XP_015625853.1InterPro:bZIPSEG:seg
Description
b-ZIP TRANSCRIPTION FACTOR 23bZIP transcription factor, Regulation of ABA signaling and biosynthesis, Drought resistance (Os02t0766700-01)
Coordinates
chr2:-:32276662..32281580
Molecular Weight (calculated)
38101.8 Da
IEP (calculated)
9.763
GRAVY (calculated)
-0.407
Length
357 amino acids
Sequence
(BLAST)
001: MDFPGGSGRQ QQLPPMTPLP LARQGSVYSL TFDEFQSTLG GVGKDFGSMN MDELLRSIWT AEESHAVGAA TTTTATTASV AAAEHAAVGA PPVQRQGSLT
101: LPRTLSQKTV DEVWRDMMCF GGGGASTAPA AAEPPPPAHR QQTLGEITLE EFLVRAGVVR EDMSVPPVPP APTPTAAAVP PPPPPQQQTP MLFGQSNVFP
201: PMVPPLSLGN GLVSGAVGHG GGGAASLVSP VRPVSSNGFG KMEGGDLSSL SPSPVPYVFK GGLRGRKAPG IEKVVERRQR RMIKNRESAA RSRQRKQAYM
301: MELEAEVAKL KELNDELQKK QDEMLEQQKN EVLERMSRQV GPTAKRICLR RTLTGPW
Best Arabidopsis Sequence Match ( AT1G45249.6 )
(BLAST)
001: MVQIQLLGGS RFCRKMDGSM NLGNEPPGDG GGGGGLTRQG SIYSLTFDEF QSSVGKDFGS MNMDELLKNI WSAEETQAMA SGVVPVLGGG QEGLQLQRQG
101: SLTLPRTLSQ KTVDQVWKDL SKVGSSGVGG SNLSQVAQAQ SQSQSQRQQT LGEVTLEEFL VRAGVVREEA QVAARAQIAE NNKGGYFGND ANTGFSVEFQ
201: QPSPRVVAAG VMGNLGAETA NSLQVQGSSL PLNVNGARTT YQQSQQQQPI MPKQPGFGYG TQMGQLNSPG IRGGGLVGLG DQSLTNNVGF VQGASAAIPG
301: ALGVGAVSPV TPLSSEGIGK SNGDSSSLSP SPYMFNGGVR GRKSGTVEKV VERRQRRMIK NRESAARSRA RKQAYTVELE AEVAKLKEEN DELQRKQARI
401: MEMQKNQETE MRNLLQGGPK KKLRRTESGP W
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.