Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52002 | Soybean | cytosol | 22.3 | 94.9 |
| KRH52003 | Soybean | nucleus | 68.82 | 87.23 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 65.23 | 60.85 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 52.52 | 55.03 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 52.76 | 54.05 |
| Os06t0211200-01 | Rice | nucleus | 41.73 | 53.7 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 49.88 | 53.61 |
| EES07580 | Sorghum | nucleus | 43.65 | 52.6 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 47.96 | 52.22 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 43.65 | 51.85 |
| Zm00001d037170_P001 | Maize | nucleus | 41.73 | 51.48 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 43.17 | 51.43 |
| KRH50289 | Soybean | nucleus | 52.28 | 51.42 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 43.88 | 51.26 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 40.77 | 51.05 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 49.16 | 50.87 |
| Zm00001d018178_P001 | Maize | nucleus | 42.69 | 50.71 |
| KXG19586 | Sorghum | nucleus | 42.21 | 50.57 |
| Os08t0472000-01 | Rice | nucleus | 38.37 | 50.31 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 41.01 | 50.29 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 43.41 | 50.28 |
| Zm00001d044940_P002 | Maize | nucleus | 42.21 | 50.14 |
| OQU78764 | Sorghum | nucleus | 37.41 | 50.0 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 41.25 | 49.86 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 41.01 | 49.85 |
| OQU80633 | Sorghum | nucleus | 45.56 | 49.74 |
| Os02t0766700-01 | Rice | nucleus | 42.45 | 49.58 |
| KRH71134 | Soybean | nucleus | 52.04 | 49.43 |
| EER96850 | Sorghum | nucleus | 42.45 | 48.36 |
| Os09t0456200-01 | Rice | nucleus | 43.17 | 47.87 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 46.04 | 47.64 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 41.49 | 47.01 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 40.77 | 46.32 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 40.53 | 46.17 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 40.29 | 45.9 |
| KXG26981 | Sorghum | nucleus | 17.99 | 45.45 |
| Zm00001d031790_P002 | Maize | nucleus | 37.65 | 43.98 |
| Zm00001d050018_P007 | Maize | nucleus | 39.81 | 42.46 |
| KRG89815 | Soybean | nucleus | 27.58 | 41.97 |
| KRH13203 | Soybean | nucleus | 29.74 | 41.06 |
| KRH62689 | Soybean | nucleus | 30.7 | 40.51 |
| KRH56272 | Soybean | nucleus | 30.7 | 40.51 |
| Zm00001d020711_P001 | Maize | nucleus | 39.09 | 40.25 |
| KRH44714 | Soybean | nucleus | 30.46 | 39.32 |
| KRH18666 | Soybean | nucleus | 26.14 | 39.21 |
| KRG94991 | Soybean | nucleus | 29.98 | 39.06 |
| KRH64894 | Soybean | nucleus | 29.02 | 38.29 |
| KRG96191 | Soybean | nucleus | 35.25 | 37.98 |
| KRG94206 | Soybean | nucleus | 29.02 | 37.69 |
| KRH10463 | Soybean | nucleus | 11.51 | 36.92 |
| AT5G42910.1 | Thale cress | nucleus | 32.13 | 36.22 |
| CDY22378 | Canola | nucleus | 34.05 | 35.95 |
| CDX71528 | Canola | nucleus | 33.57 | 35.81 |
| Zm00001d005884_P002 | Maize | nucleus | 25.66 | 35.08 |
| KRH43979 | Soybean | nucleus | 13.43 | 35.0 |
| KRH57716 | Soybean | nucleus | 27.34 | 34.97 |
| KRH32737 | Soybean | nucleus | 36.69 | 34.23 |
| Bra033649.1-P | Field mustard | nucleus | 33.81 | 34.06 |
| KRH22688 | Soybean | nucleus | 25.9 | 32.14 |
| KRH20056 | Soybean | nucleus | 36.93 | 31.17 |
| KRH58352 | Soybean | nucleus | 16.31 | 30.36 |
| KRH42235 | Soybean | nucleus, plastid | 16.79 | 29.29 |
| KRH37750 | Soybean | nucleus | 14.15 | 27.96 |
| KRH35126 | Soybean | nucleus | 16.31 | 27.53 |
| KRH16634 | Soybean | mitochondrion | 18.94 | 26.87 |
| KRH18840 | Soybean | nucleus | 17.27 | 26.67 |
| KRH26009 | Soybean | nucleus, plastid | 8.63 | 19.46 |
| KRH26633 | Soybean | mitochondrion | 25.42 | 16.46 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100819313 | MapMan:15.5.4.1 | ProteinID:ABC47854.1 | EMBL:ACUP02002160 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_04G039300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | ProteinID:KRH61297.1 | EnsemblPlants:KRH61298 | ProteinID:KRH61298 | ProteinID:KRH61298.1 | EMBL:KT031146 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF368 | UniProt:Q00M78 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0000E583C0 | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:+:3115027..3119946
Molecular Weight (calculated)
45248.6 Da
IEP (calculated)
10.489
GRAVY (calculated)
-0.689
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFKSFGNEA GGGGGRQAGN FSLTRQPSVY SLTFDEFMNS MGGSGKDFGS MNMDELLKNI WTAEEVQTMA SAGVAADDGG AGVSHLQRQG SLTLPRTLSQ
101: KTVDEVWKDI SKDHGGPNLA QTQREPTLGE VTLEEFLVRA GVVREDAKPN ESVFVDLSRV GNNSGLGLGF QQRNKVAAAT GLMGNRLNND PLVGLQPSAN
201: LPLNVNGVRT SNQQPQMQSP QSQHQHQHQH QQQQQQIFPK QSAMSYAAAQ MPQGMVRGGV VGLGDQGLSV QGGGIGMVGL APGSVHVATG SPAANQLSSG
301: DRIGKSNGDS SSVSPVPYVF NGSLRGRKNG GAVEKVIERR QRRMIKNRES AARSRARKQA YTMELEAEVA KLKEENQELQ KKQAEIMEIQ KNQVKEMMNL
401: QREVKRRRLR RTQTGPW
101: KTVDEVWKDI SKDHGGPNLA QTQREPTLGE VTLEEFLVRA GVVREDAKPN ESVFVDLSRV GNNSGLGLGF QQRNKVAAAT GLMGNRLNND PLVGLQPSAN
201: LPLNVNGVRT SNQQPQMQSP QSQHQHQHQH QQQQQQIFPK QSAMSYAAAQ MPQGMVRGGV VGLGDQGLSV QGGGIGMVGL APGSVHVATG SPAANQLSSG
301: DRIGKSNGDS SSVSPVPYVF NGSLRGRKNG GAVEKVIERR QRRMIKNRES AARSRARKQA YTMELEAEVA KLKEENQELQ KKQAEIMEIQ KNQVKEMMNL
401: QREVKRRRLR RTQTGPW
001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.