Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57716 | Soybean | nucleus | 91.59 | 90.18 |
| KRG94991 | Soybean | nucleus | 68.85 | 69.06 |
| KRH64894 | Soybean | nucleus | 67.29 | 68.35 |
| CDX72108 | Canola | nucleus | 50.47 | 64.54 |
| CDY51261 | Canola | nucleus | 49.22 | 63.2 |
| CDY27189 | Canola | nucleus | 46.73 | 60.73 |
| Bra014668.1-P | Field mustard | nucleus | 43.3 | 60.7 |
| Bra007276.1-P | Field mustard | nucleus | 52.34 | 59.57 |
| Bra007274.1-P | Field mustard | nucleus | 52.02 | 59.22 |
| CDX76014 | Canola | nucleus | 49.84 | 59.04 |
| CDX67659 | Canola | nucleus | 47.04 | 58.3 |
| AT3G56850.1 | Thale cress | nucleus | 53.89 | 58.25 |
| KRH62689 | Soybean | nucleus | 56.07 | 56.96 |
| KRH56272 | Soybean | nucleus | 56.07 | 56.96 |
| PGSC0003DMT400072260 | Potato | nucleus | 61.37 | 56.77 |
| CDY47381 | Canola | nucleus | 51.09 | 56.55 |
| PGSC0003DMT400018574 | Potato | nucleus | 55.45 | 55.8 |
| AT2G41070.4 | Thale cress | nucleus | 47.04 | 55.72 |
| Solyc10g081350.1.1 | Tomato | nucleus | 60.75 | 55.71 |
| CDY57581 | Canola | nucleus | 47.04 | 55.51 |
| Bra016953.1-P | Field mustard | nucleus | 45.17 | 54.31 |
| KRH13203 | Soybean | nucleus | 51.09 | 54.3 |
| KRH44714 | Soybean | nucleus | 54.52 | 54.18 |
| CDY06946 | Canola | nucleus | 46.42 | 53.99 |
| CDY53679 | Canola | nucleus | 44.24 | 51.82 |
| Bra004597.1-P | Field mustard | nucleus | 45.17 | 51.6 |
| KRG89815 | Soybean | nucleus | 43.93 | 51.46 |
| CDX79959 | Canola | nucleus | 45.17 | 51.42 |
| Solyc10g076920.1.1 | Tomato | nucleus | 43.61 | 49.47 |
| KRH18666 | Soybean | nucleus | 41.43 | 47.84 |
| Bra003253.1-P | Field mustard | plastid | 49.53 | 39.45 |
| KRH10463 | Soybean | nucleus | 15.26 | 37.69 |
| KRH52002 | Soybean | cytosol | 11.21 | 36.73 |
| KRH43979 | Soybean | nucleus | 16.2 | 32.5 |
| KRG96191 | Soybean | nucleus | 37.38 | 31.01 |
| KRH58352 | Soybean | nucleus | 21.18 | 30.36 |
| KRH50289 | Soybean | nucleus | 39.56 | 29.95 |
| KRH16634 | Soybean | mitochondrion | 27.1 | 29.59 |
| KRH22688 | Soybean | nucleus | 30.84 | 29.46 |
| KRH61298 | Soybean | nucleus | 37.69 | 29.02 |
| KRH42235 | Soybean | nucleus, plastid | 21.5 | 28.87 |
| KRH71134 | Soybean | nucleus | 38.94 | 28.47 |
| KRH18840 | Soybean | nucleus | 23.36 | 27.78 |
| KRH32737 | Soybean | nucleus | 37.07 | 26.62 |
| KRH37750 | Soybean | nucleus | 17.13 | 26.07 |
| KRH35126 | Soybean | nucleus | 19.94 | 25.91 |
| KRH20056 | Soybean | nucleus | 37.38 | 24.29 |
| KRH52003 | Soybean | nucleus | 23.99 | 23.4 |
| KRH26009 | Soybean | nucleus, plastid | 11.53 | 20.0 |
| KRH26633 | Soybean | mitochondrion | 29.28 | 14.6 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100170741 | MapMan:15.5.4.1 | EMBL:ACUP02011822 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G067900 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1N7B0 | InterPro:IPR004827 | EnsemblPlants:KRG94206 | ProteinID:KRG94206 |
| ProteinID:KRG94206.1 | EMBL:KT031143 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF373 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000233F16D | InterPro:bZIP | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:+:19873083..19878459
Molecular Weight (calculated)
34906.4 Da
IEP (calculated)
10.019
GRAVY (calculated)
-0.655
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSQGGAVQE PKTTTPLARQ GSLYNLTLDE VHNQLGNLGK PLGSMNLDEL LKSVWSAEAG GGGEASGWDF GVGDATNMPH GKAAASGSSL NPQGSLTLSR
101: DLSRKTVDEV WKDMQLKKVT NRDKKIQERQ ATLGEMTLED FLVKAGVVAE ALPTKGGAMS GVDSNGAFSQ HGHWLQYQQL SSSTQQPNVM GGYVAGHAIQ
201: QPFQVGVNLV LDAAYSEQPA SLMGTLSDTQ TPGRKRGASG VVVEKTVERR QKRMIKNRES AARSRARRQA YTQELEIKVS RLEEENERLR RLNEMERALP
301: SVPPPEPKPK QQLRRTSSAI F
101: DLSRKTVDEV WKDMQLKKVT NRDKKIQERQ ATLGEMTLED FLVKAGVVAE ALPTKGGAMS GVDSNGAFSQ HGHWLQYQQL SSSTQQPNVM GGYVAGHAIQ
201: QPFQVGVNLV LDAAYSEQPA SLMGTLSDTQ TPGRKRGASG VVVEKTVERR QKRMIKNRES AARSRARRQA YTQELEIKVS RLEEENERLR RLNEMERALP
301: SVPPPEPKPK QQLRRTSSAI F
001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.