Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06946 | Canola | nucleus | 93.75 | 92.39 |
| CDY53679 | Canola | nucleus | 76.84 | 76.28 |
| CDX79959 | Canola | nucleus | 78.68 | 75.89 |
| AT2G41070.4 | Thale cress | nucleus | 73.16 | 73.43 |
| CDX72108 | Canola | nucleus | 63.24 | 68.53 |
| CDY51261 | Canola | nucleus | 60.29 | 65.6 |
| CDX76014 | Canola | nucleus | 64.34 | 64.58 |
| CDY27189 | Canola | nucleus | 57.72 | 63.56 |
| CDX67659 | Canola | nucleus | 60.29 | 63.32 |
| CDY47381 | Canola | nucleus | 64.71 | 60.69 |
| KRG94206 | Soybean | nucleus | 55.51 | 47.04 |
| KRG94991 | Soybean | nucleus | 54.41 | 46.25 |
| KRH64894 | Soybean | nucleus | 53.31 | 45.89 |
| KRH57716 | Soybean | nucleus | 53.68 | 44.79 |
| PGSC0003DMT400018574 | Potato | nucleus | 51.1 | 43.57 |
| PGSC0003DMT400072260 | Potato | nucleus | 52.57 | 41.21 |
| Solyc10g081350.1.1 | Tomato | nucleus | 52.94 | 41.14 |
| CDY28083 | Canola | nucleus | 33.46 | 38.4 |
| Solyc10g076920.1.1 | Tomato | nucleus | 38.6 | 37.1 |
| CDY65560 | Canola | nucleus | 37.5 | 33.77 |
| CDY51041 | Canola | nucleus | 38.6 | 31.82 |
| CDY17109 | Canola | nucleus | 37.13 | 30.15 |
| CDY68227 | Canola | nucleus | 36.76 | 28.65 |
| CDY18575 | Canola | nucleus | 36.76 | 28.41 |
| CDX69020 | Canola | nucleus | 36.4 | 28.29 |
| CDY63041 | Canola | nucleus | 36.76 | 28.25 |
| CDX92320 | Canola | nucleus | 36.76 | 28.17 |
| CDX99242 | Canola | nucleus | 36.4 | 27.97 |
| CDX84141 | Canola | nucleus | 40.44 | 27.92 |
| CDX75056 | Canola | nucleus | 40.44 | 27.57 |
| CDY43738 | Canola | nucleus | 40.07 | 26.98 |
| CDX82302 | Canola | nucleus | 35.66 | 26.65 |
| CDY08701 | Canola | nucleus | 33.46 | 26.3 |
| CDY10500 | Canola | nucleus | 33.46 | 26.3 |
| CDY58256 | Canola | nucleus | 37.13 | 25.83 |
| CDX72445 | Canola | nucleus | 37.87 | 25.12 |
| CDY22311 | Canola | nucleus, plastid | 24.26 | 24.81 |
| CDY54481 | Canola | nucleus | 25.74 | 24.48 |
| CDX71528 | Canola | nucleus | 31.99 | 22.25 |
| CDY22378 | Canola | nucleus | 31.99 | 22.03 |
| CDX89852 | Canola | nucleus, plastid | 21.69 | 22.01 |
| CDY18197 | Canola | nucleus, plastid | 21.69 | 21.93 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078J290 | UniProt:A0A078J290 | EnsemblPlants:CDY57581 | ProteinID:CDY57581 |
| ProteinID:CDY57581.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00022389001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EF2D9E | InterPro:bZIP | : | : | : |
Description
BnaC04g56840DBnaC04g56840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J290]
Coordinates
chrLK033586:+:40860..42349
Molecular Weight (calculated)
30764.8 Da
IEP (calculated)
7.801
GRAVY (calculated)
-0.775
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLRGNVEE PIHQSLPRQN SLYNLKLHEV QNHLGSSSKP LGSMNLDELL KSVLSAEANH PPEEGTEEGI TRQGSLTLPR GLSIKTVNEV WRDIQHGERL
101: DNPNKQPTLG EITLEDLLMK AGVVTESMTV PQNVVNVASN GQWAQYPQQQ HQGFMPYPVC DMQEMVPPTA LMMGGLSETQ QVHGRKRVAS SEGEFVERIV
201: ERKQKRMIKN RESASRSRAR KQAYTQELEI KVSSLEEENQ KLRRLMEVEK ILPSEPPPEP KWKLRRTSTA SF
101: DNPNKQPTLG EITLEDLLMK AGVVTESMTV PQNVVNVASN GQWAQYPQQQ HQGFMPYPVC DMQEMVPPTA LMMGGLSETQ QVHGRKRVAS SEGEFVERIV
201: ERKQKRMIKN RESASRSRAR KQAYTQELEI KVSSLEEENQ KLRRLMEVEK ILPSEPPPEP KWKLRRTSTA SF
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.