Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79959 | Canola | nucleus | 94.53 | 91.84 |
| AT2G41070.4 | Thale cress | nucleus | 76.28 | 77.12 |
| CDY57581 | Canola | nucleus | 76.28 | 76.84 |
| CDY06946 | Canola | nucleus | 77.37 | 76.81 |
| CDX72108 | Canola | nucleus | 66.79 | 72.91 |
| CDY27189 | Canola | nucleus | 64.23 | 71.26 |
| CDY51261 | Canola | nucleus | 64.6 | 70.8 |
| CDX76014 | Canola | nucleus | 64.96 | 65.68 |
| CDX67659 | Canola | nucleus | 60.95 | 64.48 |
| CDY47381 | Canola | nucleus | 67.15 | 63.45 |
| KRG94991 | Soybean | nucleus | 52.55 | 45.0 |
| KRH64894 | Soybean | nucleus | 51.82 | 44.94 |
| KRG94206 | Soybean | nucleus | 51.82 | 44.24 |
| PGSC0003DMT400018574 | Potato | nucleus | 49.27 | 42.32 |
| KRH57716 | Soybean | nucleus | 49.63 | 41.72 |
| PGSC0003DMT400072260 | Potato | nucleus | 52.19 | 41.21 |
| Solyc10g081350.1.1 | Tomato | nucleus | 51.82 | 40.57 |
| CDY28083 | Canola | nucleus | 32.48 | 37.55 |
| Solyc10g076920.1.1 | Tomato | nucleus | 36.13 | 34.98 |
| CDY65560 | Canola | nucleus | 36.86 | 33.44 |
| CDY51041 | Canola | nucleus | 38.32 | 31.82 |
| CDY17109 | Canola | nucleus | 37.23 | 30.45 |
| CDY68227 | Canola | nucleus | 36.5 | 28.65 |
| CDY18575 | Canola | nucleus | 36.5 | 28.41 |
| CDY10500 | Canola | nucleus | 35.77 | 28.32 |
| CDX69020 | Canola | nucleus | 36.13 | 28.29 |
| CDX92320 | Canola | nucleus | 36.5 | 28.17 |
| CDY08701 | Canola | nucleus | 35.4 | 28.03 |
| CDX99242 | Canola | nucleus | 36.13 | 27.97 |
| CDY63041 | Canola | nucleus | 35.77 | 27.68 |
| CDX84141 | Canola | nucleus | 39.78 | 27.66 |
| CDX75056 | Canola | nucleus | 39.78 | 27.32 |
| CDY43738 | Canola | nucleus | 39.78 | 26.98 |
| CDX82302 | Canola | nucleus | 35.04 | 26.37 |
| CDX72445 | Canola | nucleus | 38.69 | 25.85 |
| CDY58256 | Canola | nucleus | 36.5 | 25.58 |
| CDY54481 | Canola | nucleus | 25.55 | 24.48 |
| CDY22311 | Canola | nucleus, plastid | 23.36 | 24.06 |
| CDX89852 | Canola | nucleus, plastid | 22.63 | 23.13 |
| CDY18197 | Canola | nucleus, plastid | 22.63 | 23.05 |
| CDY22378 | Canola | nucleus | 31.39 | 21.77 |
| CDX71528 | Canola | nucleus | 30.66 | 21.48 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078IWB2 | UniProt:A0A078IWB2 | EnsemblPlants:CDY53679 | ProteinID:CDY53679 |
| ProteinID:CDY53679.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00011228001 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0004EF3436 | InterPro:bZIP | SEG:seg | : | : |
Description
BnaC04g52290DBnaC04g52290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWB2]
Coordinates
chrLK033226:+:53739..55226
Molecular Weight (calculated)
30784.7 Da
IEP (calculated)
9.367
GRAVY (calculated)
-0.861
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLRGNVEE PISQSLPRQN SLYSLKLHEV QNHLGSSAKP LGSMNLDELL KSPREATEAG LSRQGSLALP RGLSKKTVEE VWREIQHDKN GSSGNPHGER
101: IDNNNNNKQP TLGEITLEDL LLKAGVVTET VLPQTVVNVA SNEPWVQYHH PQHQQQGFMP YPVCEMQEMV SPMNMMMGDA PQAHGRKGAA PSGGDIVERV
201: VERRQKRMIK NRESAARSRA RKQQAYTHEL EIKVSSLEEE NEKLRRLKEV EKILPSEPPP DPKWKLRRTS SASF
101: IDNNNNNKQP TLGEITLEDL LLKAGVVTET VLPQTVVNVA SNEPWVQYHH PQHQQQGFMP YPVCEMQEMV SPMNMMMGDA PQAHGRKGAA PSGGDIVERV
201: VERRQKRMIK NRESAARSRA RKQQAYTHEL EIKVSSLEEE NEKLRRLKEV EKILPSEPPP DPKWKLRRTS SASF
001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L
Arabidopsis Description
EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.