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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • endoplasmic reticulum 1
  • plastid 1
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g081350.1.1 Tomato nucleus 97.12 96.29
PGSC0003DMT400018574 Potato nucleus 63.69 69.28
CDX72108 Canola nucleus 45.82 63.35
KRG94991 Soybean nucleus 57.06 61.88
CDY51261 Canola nucleus 44.38 61.6
KRH64894 Soybean nucleus 55.91 61.39
KRG94206 Soybean nucleus 56.77 61.37
CDY27189 Canola nucleus 43.23 60.73
Bra007276.1-P Field mustard nucleus 48.41 59.57
Bra007274.1-P Field mustard nucleus 48.41 59.57
Bra014668.1-P Field mustard nucleus 39.19 59.39
KRH57716 Soybean nucleus 55.62 59.2
CDX67659 Canola nucleus 43.23 57.92
AT3G56850.1 Thale cress nucleus 49.57 57.91
CDX76014 Canola nucleus 44.67 57.2
AT2G41070.4 Thale cress nucleus 43.8 56.09
CDY47381 Canola nucleus 46.69 55.86
PGSC0003DMT400058469 Potato nucleus 23.05 54.79
CDY57581 Canola nucleus 41.21 52.57
CDY53679 Canola nucleus 41.21 52.19
Bra016953.1-P Field mustard nucleus 40.06 52.06
Bra004597.1-P Field mustard nucleus 42.07 51.96
CDX79959 Canola nucleus 42.07 51.77
CDY06946 Canola nucleus 40.92 51.45
Bra003253.1-P Field mustard plastid 45.82 39.45
PGSC0003DMT400059040 Potato nucleus 32.56 30.87
PGSC0003DMT400066603 Potato nucleus 35.45 29.71
PGSC0003DMT400020670 Potato nucleus 37.75 28.92
PGSC0003DMT400015892 Potato nucleus 34.01 28.5
PGSC0003DMT400006851 Potato nucleus 33.72 27.34
PGSC0003DMT400076576 Potato nucleus 21.9 26.76
Protein Annotations
Gene3D:1.20.5.170EntrezGene:102600966MapMan:15.5.4.1ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR004827UniProt:M1CPY9PFAM:PF00170EnsemblPlantsGene:PGSC0003DMG400028121PGSC:PGSC0003DMG400028121EnsemblPlants:PGSC0003DMT400072260
ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF137SMART:SM00338SUPFAM:SSF57959
UniParc:UPI0002947FAERefSeq:XP_006339213.1InterPro:bZIPSEG:seg::
Description
BZIP domain class transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400028121]
Coordinates
chr10:-:56590880..56596851
Molecular Weight (calculated)
37874.8 Da
IEP (calculated)
8.766
GRAVY (calculated)
-0.724
Length
347 amino acids
Sequence
(BLAST)
001: MGSQGGGGGG GGGVGVNSIG ATQTQAQAQA HAQDPKTNAL ARQGSLYSLT LDEVQNQLGD LGKPLSSMNL DELLKTVWTV EASQGMGGTD YGVLQHGQDA
101: SGSSLNRQSS ITLTSDLSKK TVDQVWQDIQ QGHKRDSIDR KAQERQPTLG EMTLEDFLVK AGVVAESTPG KKSSGSVLGV DSMALPQQQA QWSQYQMHAM
201: HQLPPQQQQQ NMLPVFMPGH SVQQPLTIVS NPTIDAAYPE SQMTMSPTAL LGTLSDTQTL GRKRVAPDDV VEKTVERRQK RMIKNRESAA RSRARKQAYT
301: HELENKVSRL EEENERLKRQ KEIEQVLPSV PLPEPKYQLR RTSSAPV
Best Arabidopsis Sequence Match ( AT3G56850.1 )
(BLAST)
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.