Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51261 | Canola | nucleus | 79.54 | 82.4 |
| CDX72108 | Canola | nucleus | 77.99 | 80.48 |
| CDY27189 | Canola | nucleus | 74.9 | 78.54 |
| AT3G56850.1 | Thale cress | nucleus | 87.26 | 76.09 |
| CDX76014 | Canola | nucleus | 76.45 | 73.06 |
| CDY47381 | Canola | nucleus | 81.08 | 72.41 |
| CDY53679 | Canola | nucleus | 64.48 | 60.95 |
| CDY57581 | Canola | nucleus | 63.32 | 60.29 |
| CDY06946 | Canola | nucleus | 63.71 | 59.78 |
| CDX79959 | Canola | nucleus | 63.71 | 58.51 |
| Bra003253.1-P | Field mustard | plastid | 89.19 | 57.32 |
| KRG94991 | Soybean | nucleus | 59.46 | 48.12 |
| KRH64894 | Soybean | nucleus | 58.3 | 47.78 |
| KRG94206 | Soybean | nucleus | 58.3 | 47.04 |
| KRH57716 | Soybean | nucleus | 55.6 | 44.17 |
| PGSC0003DMT400072260 | Potato | nucleus | 57.92 | 43.23 |
| Solyc10g081350.1.1 | Tomato | nucleus | 57.92 | 42.86 |
| PGSC0003DMT400018574 | Potato | nucleus | 51.35 | 41.69 |
| CDY28083 | Canola | nucleus | 32.82 | 35.87 |
| Solyc10g076920.1.1 | Tomato | nucleus | 36.68 | 33.57 |
| CDY65560 | Canola | nucleus | 37.84 | 32.45 |
| CDY51041 | Canola | nucleus | 39.77 | 31.21 |
| CDY17109 | Canola | nucleus | 39.38 | 30.45 |
| CDY68227 | Canola | nucleus | 37.84 | 28.08 |
| CDX69020 | Canola | nucleus | 37.45 | 27.71 |
| CDX92320 | Canola | nucleus | 37.45 | 27.32 |
| CDX99242 | Canola | nucleus | 37.07 | 27.12 |
| CDY18575 | Canola | nucleus | 36.68 | 26.99 |
| CDX84141 | Canola | nucleus | 40.93 | 26.9 |
| CDY63041 | Canola | nucleus | 36.68 | 26.84 |
| CDX75056 | Canola | nucleus | 40.54 | 26.32 |
| CDX82302 | Canola | nucleus | 36.29 | 25.82 |
| CDY43738 | Canola | nucleus | 40.15 | 25.74 |
| CDX72445 | Canola | nucleus | 40.15 | 25.37 |
| CDY10500 | Canola | nucleus | 33.59 | 25.14 |
| CDY08701 | Canola | nucleus | 33.2 | 24.86 |
| CDY58256 | Canola | nucleus | 37.07 | 24.55 |
| CDY22311 | Canola | nucleus, plastid | 23.55 | 22.93 |
| CDY54481 | Canola | nucleus | 25.1 | 22.73 |
| CDX71528 | Canola | nucleus | 32.82 | 21.74 |
| CDY18197 | Canola | nucleus, plastid | 22.01 | 21.19 |
| CDY22378 | Canola | nucleus | 32.05 | 21.01 |
| CDX89852 | Canola | nucleus, plastid | 21.62 | 20.9 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078BVD8 | EnsemblPlants:CDX67659 | ProteinID:CDX67659 | ProteinID:CDX67659.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00098828001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF137 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0004EE6F61 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BnaA07g16990D
Coordinates
chrLK031787:-:1605575..1606686
Molecular Weight (calculated)
28762.4 Da
IEP (calculated)
9.685
GRAVY (calculated)
-0.701
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSHRVIVED PKSQFLNRQQ GSSLYTLTLD EVQTHLGSSG KPLGSMNLDE LLKSVCSVEP NQPPSVAVNE GLSRQGSLAL PRAHERRDKQ GTLGEMTLED
101: LLLKAGVVTE TIPGSNHDDP GGGAGLAPWV QYHQLPSMTQ PRSFLPYLVA DMQVMVSQAS LMGGLSDTQT PGRKRVASGE VVEKIVERKQ KRMIKNRESA
201: ARSRARKQQA YTHELEINVS RLEEENERLR RQKEVEKILP SAPPPDPKRQ LRRTSSAPF
101: LLLKAGVVTE TIPGSNHDDP GGGAGLAPWV QYHQLPSMTQ PRSFLPYLVA DMQVMVSQAS LMGGLSDTQT PGRKRVASGE VVEKIVERKQ KRMIKNRESA
201: ARSRARKQQA YTHELEINVS RLEEENERLR RQKEVEKILP SAPPPDPKRQ LRRTSSAPF
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.