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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033719.1-P Field mustard nucleus, plastid 99.25 99.25
CDY54481 Canola nucleus 95.86 89.16
AT5G44080.1 Thale cress nucleus 81.2 68.57
CDX89852 Canola nucleus, plastid 54.89 54.48
CDY18197 Canola nucleus, plastid 53.76 53.16
VIT_18s0072g00470.t01 Wine grape nucleus, plastid 50.38 48.73
KRH35126 Soybean nucleus 43.23 46.56
Solyc04g071510.2.1 Tomato nucleus, plastid 48.5 41.88
TraesCS3D01G371900.1 Wheat nucleus 37.59 40.0
GSMUA_Achr9P08900_001 Banana nucleus 36.84 39.52
TraesCS3A01G378700.1 Wheat nucleus 37.97 39.3
HORVU3Hr1G083250.2 Barley nucleus 32.33 38.91
TraesCS3B01G411300.1 Wheat nucleus 36.47 38.8
GSMUA_Achr3P22470_001 Banana nucleus 36.47 37.89
EES03943 Sorghum nucleus 35.34 35.88
GSMUA_Achr2P20490_001 Banana nucleus 32.71 35.8
Zm00001d042721_P001 Maize nucleus 34.59 35.38
TraesCS1D01G273100.1 Wheat nucleus 33.08 34.92
TraesCS1B01G282800.1 Wheat nucleus 33.08 34.92
GSMUA_Achr10P... Banana nucleus 34.96 34.83
TraesCS1A01G273000.1 Wheat nucleus 33.08 34.78
Os01t0867300-01 Rice nucleus 34.21 34.21
Zm00001d038311_P001 Maize nucleus 31.58 33.07
EES18296 Sorghum nucleus, plastid 31.95 31.84
Os05t0437700-01 Rice plastid 29.32 31.58
HORVU1Hr1G074960.8 Barley mitochondrion, nucleus, plastid 28.57 30.28
Zm00001d012273_P001 Maize plastid 27.07 29.51
CDY51261 Canola nucleus 25.56 27.2
CDX72108 Canola nucleus 24.44 25.9
CDX76014 Canola nucleus 25.19 24.72
CDY27189 Canola nucleus 22.56 24.29
CDY57581 Canola nucleus 24.81 24.26
CDY28083 Canola nucleus 21.43 24.05
CDX67659 Canola nucleus 22.93 23.55
CDY06946 Canola nucleus 24.44 23.55
CDY53679 Canola nucleus 24.06 23.36
CDY47381 Canola nucleus 25.19 23.1
CDX79959 Canola nucleus 23.31 21.99
CDY65560 Canola nucleus 23.31 20.53
CDY17109 Canola nucleus 24.81 19.7
CDY51041 Canola nucleus 23.68 19.09
CDX75056 Canola nucleus 27.44 18.3
CDX84141 Canola nucleus 27.07 18.27
CDY10500 Canola nucleus 23.68 18.21
CDY43738 Canola nucleus 27.44 18.07
CDY68227 Canola nucleus 23.68 18.05
CDX92320 Canola nucleus 24.06 18.03
CDX69020 Canola nucleus 23.68 18.0
CDY08701 Canola nucleus 23.31 17.92
CDX99242 Canola nucleus 23.68 17.8
CDY63041 Canola nucleus 23.31 17.51
CDY18575 Canola nucleus 22.56 17.05
CDX82302 Canola nucleus 21.8 15.93
CDX72445 Canola nucleus 24.44 15.85
CDY58256 Canola nucleus 22.18 15.09
CDX71528 Canola nucleus 20.68 14.07
CDY22378 Canola nucleus 20.68 13.92
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1GO:A0A078GA92UniProt:A0A078GA92EnsemblPlants:CDY22311ProteinID:CDY22311
ProteinID:CDY22311.1ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987EnsemblPlantsGene:GSBRNA2T00018780001InterPro:IPR004827
PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF184SMART:SM00338
SUPFAM:SSF57959UniParc:UPI0004EE7D26InterPro:bZIPSEG:seg::
Description
BnaA06g36330DBnaA06g36330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GA92]
Coordinates
chrLK032130:+:70845..71734
Molecular Weight (calculated)
29797.2 Da
IEP (calculated)
5.543
GRAVY (calculated)
-0.769
Length
266 amino acids
Sequence
(BLAST)
001: MASFKVMHSP SSTNSDPSRR IPSSSIRPRR DPNARILGGY DGYSPAAMTV EGILHETFAS DPPATDSSLL MDASPTATVS GGTDTRGKSV DEVWRGMKEE
101: EEMMTLEDFL AKATGEDGGG ESDDVDVKIP PAESYGFDHH NPFQMIDKVE GSIVAFGNGV DVYGGGARGK RARVMMEPLD KAAAQRQRRM IKNRESAARS
201: RERKQAYQVE LETLAAKLEE ENEKLSVEIE EKRKERYQKL MEFVIPVVER PKQEPRFLRR IRSLEW
Best Arabidopsis Sequence Match ( AT5G44080.1 )
(BLAST)
001: MTSFQVMRSS NSRNSDLSRR ISSASTSSSS IRPQQQFRRD LTSVGYGGRN DGLYSSNSMT VEGILHDTFA SDPPAPTESS LLDASINLMD ASPAPMEITT
101: TTASDVVDHG GGTETTRGGK SVDEIWREMV SGEGKGMKEE TSEEIMTLED FLAKAAVEDE TAVTASAEDL DVKIPVTNYG FDHSAPPHNP FQMIDKVEGS
201: IVAFGNGLDV YGGGARGKRA RVMVEPLDKA AAQRQRRMIK NRESAARSRE RKQAYQVELE ALAAKLEEEN ELLSKEIEDK RKERYQKLME FVIPVVEKPK
301: QQPPRFLRRI RSLEW
Arabidopsis Description
Basic leucine zipper transcription factor [Source:UniProtKB/TrEMBL;Acc:Q9FNB9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.