Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001742.1-P | Field mustard | nucleus | 91.48 | 93.8 |
| CDY63041 | Canola | nucleus | 82.42 | 84.75 |
| CDY18575 | Canola | nucleus | 73.63 | 76.14 |
| CDX99242 | Canola | nucleus | 73.08 | 75.14 |
| CDX92320 | Canola | nucleus | 72.8 | 74.65 |
| CDY58256 | Canola | nucleus | 79.95 | 74.42 |
| AT3G19290.3 | Thale cress | nucleus | 81.59 | 68.75 |
| CDY28083 | Canola | nucleus | 42.86 | 65.82 |
| CDY51041 | Canola | nucleus | 56.87 | 62.73 |
| CDY65560 | Canola | nucleus | 42.58 | 51.32 |
| CDX69020 | Canola | nucleus | 47.8 | 49.71 |
| CDY68227 | Canola | nucleus | 47.53 | 49.57 |
| CDY17109 | Canola | nucleus | 43.96 | 47.76 |
| Os06t0211200-01 | Rice | nucleus | 42.03 | 47.22 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 52.75 | 46.94 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 45.05 | 46.72 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 44.78 | 46.57 |
| EES07580 | Sorghum | nucleus | 44.23 | 46.53 |
| PGSC0003DMT400059040 | Potato | nucleus | 46.43 | 46.17 |
| Zm00001d037170_P001 | Maize | nucleus | 42.86 | 46.15 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 45.05 | 45.94 |
| Os02t0766700-01 | Rice | nucleus | 44.78 | 45.66 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 41.76 | 45.65 |
| EER96850 | Sorghum | nucleus | 45.88 | 45.63 |
| Zm00001d018178_P001 | Maize | nucleus | 43.96 | 45.58 |
| Os08t0472000-01 | Rice | nucleus | 39.56 | 45.28 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 44.78 | 45.28 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 42.03 | 45.0 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 49.18 | 44.97 |
| Solyc01g108080.2.1 | Tomato | nucleus | 50.82 | 44.69 |
| Zm00001d044940_P002 | Maize | nucleus | 42.86 | 44.44 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 41.76 | 44.31 |
| KXG19586 | Sorghum | nucleus | 42.31 | 44.25 |
| PGSC0003DMT400066603 | Potato | nucleus | 50.27 | 44.2 |
| KRH50289 | Soybean | nucleus | 51.37 | 44.1 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 41.76 | 44.06 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 44.23 | 43.75 |
| OQU80633 | Sorghum | nucleus | 45.88 | 43.72 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 45.88 | 43.6 |
| Os09t0456200-01 | Rice | nucleus | 44.78 | 43.35 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 46.15 | 43.3 |
| CDX72445 | Canola | nucleus | 48.63 | 43.17 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 43.41 | 43.17 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 43.13 | 42.9 |
| OQU78764 | Sorghum | nucleus | 36.54 | 42.63 |
| KRH71134 | Soybean | nucleus | 51.37 | 42.6 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 42.58 | 42.23 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 46.7 | 42.18 |
| Solyc11g044560.1.1 | Tomato | nucleus | 45.6 | 41.6 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 46.15 | 41.28 |
| PGSC0003DMT400015892 | Potato | nucleus | 46.7 | 41.06 |
| Solyc10g050210.1.1 | Tomato | nucleus | 42.31 | 39.69 |
| CDY27189 | Canola | nucleus | 26.65 | 39.27 |
| CDY51261 | Canola | nucleus | 26.92 | 39.2 |
| CDX72108 | Canola | nucleus | 26.92 | 39.04 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 42.86 | 38.71 |
| Zm00001d020711_P001 | Maize | nucleus | 41.48 | 37.28 |
| Zm00001d031790_P002 | Maize | nucleus | 36.54 | 37.25 |
| Zm00001d050018_P007 | Maize | nucleus | 39.84 | 37.08 |
| CDX76014 | Canola | nucleus | 27.2 | 36.53 |
| CDX67659 | Canola | nucleus | 25.82 | 36.29 |
| KXG26981 | Sorghum | nucleus | 16.21 | 35.76 |
| CDY57581 | Canola | nucleus | 26.65 | 35.66 |
| CDY06946 | Canola | nucleus | 26.65 | 35.14 |
| CDY53679 | Canola | nucleus | 26.37 | 35.04 |
| CDY47381 | Canola | nucleus | 27.47 | 34.48 |
| CDX79959 | Canola | nucleus | 26.1 | 33.69 |
| Zm00001d005884_P002 | Maize | nucleus | 27.75 | 33.11 |
| CDX84141 | Canola | nucleus | 32.69 | 30.2 |
| CDY43738 | Canola | nucleus | 33.24 | 29.95 |
| CDX75056 | Canola | nucleus | 32.69 | 29.82 |
| CDX71528 | Canola | nucleus | 31.04 | 28.9 |
| CDY10500 | Canola | nucleus | 27.2 | 28.61 |
| CDY22378 | Canola | nucleus | 31.04 | 28.61 |
| CDY08701 | Canola | nucleus | 26.92 | 28.32 |
| CDX89852 | Canola | nucleus, plastid | 16.21 | 22.01 |
| CDY22311 | Canola | nucleus, plastid | 15.93 | 21.8 |
| CDY18197 | Canola | nucleus, plastid | 15.93 | 21.56 |
| CDY54481 | Canola | nucleus | 16.76 | 21.33 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | GO:A0A078CZL1 | EnsemblPlants:CDX82302 | ProteinID:CDX82302 | ProteinID:CDX82302.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00137411001 | InterPro:IPR004827 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF158 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0004EF011C | InterPro:bZIP | SEG:seg | : | : | : |
Description
BnaA03g35190D
Coordinates
chrLK031828:-:468123..470577
Molecular Weight (calculated)
39801.9 Da
IEP (calculated)
9.739
GRAVY (calculated)
-0.712
Length
364 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTHINFNSL GGGGSYQMKP TDSPNPLARQ SSVYSLTFDE LQSTFGGPGK DLGSMNMDEL LKSIWTAEEA QAMTSSAATA VAQHGGGNLQ RQGSLTLPRT
101: ISQKTVDEVW KFLITKDGEM GGSSNGESNA QQTLGEMKIE DFLFRAGVVR EDNNEFYGNN GSAEGLGFGF GQLNQNNISF NGTNDSMILN QPPGSCLKVG
201: GTTQHQRMPQ TIFPKQTNVE FAASVCMVNK GFTGAVNNDN GLASFRGEGV KIAATSPGTS SAENNSLSPV PYVLNRGRRS NTGVEKVIER RQRRKIKNRE
301: SAARSRARKQ AYTLELEAEI EKLKKVNQEL QRKQAEMMEM QKNEVNEPRG SKRQCLRRTL TGPW
101: ISQKTVDEVW KFLITKDGEM GGSSNGESNA QQTLGEMKIE DFLFRAGVVR EDNNEFYGNN GSAEGLGFGF GQLNQNNISF NGTNDSMILN QPPGSCLKVG
201: GTTQHQRMPQ TIFPKQTNVE FAASVCMVNK GFTGAVNNDN GLASFRGEGV KIAATSPGTS SAENNSLSPV PYVLNRGRRS NTGVEKVIER RQRRKIKNRE
301: SAARSRARKQ AYTLELEAEI EKLKKVNQEL QRKQAEMMEM QKNEVNEPRG SKRQCLRRTL TGPW
001: MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VMPLARQSSV YSLTFDELQN TLGGPGKDFG SMNMDELLKS IWTAEEAQAM AMTSAPAATA VAQPGAGIPP
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
Arabidopsis Description
ABF4ABRE binding factor 4 [Source:UniProtKB/TrEMBL;Acc:F4JB53]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.