Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020711_P001 | Maize | nucleus | 84.15 | 76.05 |
| Os09t0456200-01 | Rice | nucleus | 77.05 | 75.0 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 71.58 | 71.2 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 70.49 | 70.49 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 70.49 | 70.49 |
| Zm00001d005884_P002 | Maize | nucleus | 58.47 | 70.16 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 69.4 | 69.21 |
| OQU78764 | Sorghum | nucleus | 53.55 | 62.82 |
| OQU80633 | Sorghum | nucleus | 63.66 | 60.99 |
| CDY65560 | Canola | nucleus | 46.45 | 56.29 |
| KRH52002 | Soybean | cytosol | 14.75 | 55.1 |
| CDY28083 | Canola | nucleus | 34.7 | 53.59 |
| CDY17109 | Canola | nucleus | 46.99 | 51.34 |
| KXG26981 | Sorghum | nucleus | 22.68 | 50.3 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 54.37 | 50.0 |
| EES07580 | Sorghum | nucleus | 46.45 | 49.13 |
| Bra022409.1-P | Field mustard | nucleus | 47.27 | 48.87 |
| CDX92320 | Canola | nucleus | 47.27 | 48.73 |
| CDX99242 | Canola | nucleus | 46.99 | 48.59 |
| CDY18575 | Canola | nucleus | 45.9 | 47.73 |
| Bra040260.1-P | Field mustard | nucleus | 47.27 | 47.53 |
| CDY51041 | Canola | nucleus | 42.35 | 46.97 |
| KXG19586 | Sorghum | nucleus | 44.54 | 46.84 |
| CDY63041 | Canola | nucleus | 45.08 | 46.61 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 49.18 | 46.39 |
| Bra001742.1-P | Field mustard | nucleus | 44.54 | 45.92 |
| CDX82302 | Canola | nucleus | 45.63 | 45.88 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 47.27 | 45.17 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 50.0 | 44.96 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 49.45 | 44.25 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 48.09 | 43.67 |
| CDY68227 | Canola | nucleus | 41.53 | 43.55 |
| CDX69020 | Canola | nucleus | 41.26 | 43.14 |
| Bra037533.1-P | Field mustard | nucleus | 45.63 | 43.04 |
| Bra018800.1-P | Field mustard | nucleus | 43.17 | 42.93 |
| KRH61298 | Soybean | nucleus | 48.36 | 42.45 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 46.72 | 42.43 |
| PGSC0003DMT400059040 | Potato | nucleus | 42.35 | 42.35 |
| CDY58256 | Canola | nucleus | 45.08 | 42.2 |
| Solyc01g108080.2.1 | Tomato | nucleus | 46.72 | 41.3 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 50.27 | 41.16 |
| AT3G19290.3 | Thale cress | nucleus | 48.36 | 40.97 |
| AT1G45249.6 | Thale cress | nucleus | 47.81 | 40.6 |
| KRH50289 | Soybean | nucleus | 46.99 | 40.57 |
| PGSC0003DMT400066603 | Potato | nucleus | 45.63 | 40.34 |
| KRH71134 | Soybean | nucleus | 46.72 | 38.95 |
| CDX72445 | Canola | nucleus | 43.44 | 38.78 |
| PGSC0003DMT400015892 | Potato | nucleus | 43.44 | 38.41 |
| Solyc11g044560.1.1 | Tomato | nucleus | 41.8 | 38.35 |
| Solyc04g078840.2.1 | Tomato | nucleus | 46.45 | 38.03 |
| EES18419 | Sorghum | nucleus | 33.61 | 37.96 |
| Solyc10g050210.1.1 | Tomato | nucleus | 40.16 | 37.89 |
| PGSC0003DMT400020670 | Potato | nucleus | 46.17 | 37.31 |
| AT1G49720.2 | Thale cress | nucleus | 40.44 | 36.72 |
| AT4G34000.2 | Thale cress | nucleus | 45.08 | 36.34 |
| EES03785 | Sorghum | nucleus | 31.97 | 35.14 |
| KRH52003 | Soybean | nucleus | 31.15 | 34.65 |
| Bra011485.1-P | Field mustard | nucleus | 40.44 | 33.71 |
| KXG39483 | Sorghum | nucleus | 21.86 | 32.79 |
| KXG33733 | Sorghum | nucleus | 36.61 | 32.6 |
| EES03943 | Sorghum | nucleus | 22.13 | 30.92 |
| CDX71528 | Canola | nucleus | 32.51 | 30.43 |
| CDY22378 | Canola | nucleus | 32.51 | 30.13 |
| AT5G42910.1 | Thale cress | nucleus | 30.33 | 30.0 |
| Bra017621.1-P | Field mustard | cytosol | 24.04 | 29.53 |
| OQU90534 | Sorghum | nucleus | 24.86 | 28.62 |
| EES18296 | Sorghum | nucleus, plastid | 20.77 | 28.46 |
| Bra033649.1-P | Field mustard | nucleus | 31.97 | 28.26 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:C5X2A7 | ncoils:Coil | EnsemblPlants:EER96850 | ProteinID:EER96850 |
| ProteinID:EER96850.1 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF190 | SMART:SM00338 | EnsemblPlantsGene:SORBI_3002G225100 | SUPFAM:SSF57959 |
| unigene:Sbi.21427 | UniParc:UPI0001A8360D | RefSeq:XP_002460329.1 | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:61692847..61698582
Molecular Weight (calculated)
39199.8 Da
IEP (calculated)
9.731
GRAVY (calculated)
-0.504
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFKNWGSSS QRRPAVVVDE GQPLARQGSV YSLTFDEFQS ALGGAATGGG GGGSGGIPKD FGSMNMDELL RSIWTAEETQ AMASASAAGA GAGMPLTPLQ
101: RQGSSLTLPR TLSAKTVDEV WRNLVRDEPP QAQVADGGGH HQQHRQSTLG EMTLEEFLVR AGVVRENPAP APPAPQPLTM MPPRPVPVAP KSSAFFGNLP
201: GADDAAAAAA LGFAPVGMGD LALIPPRAAA GMGGSAMAVQ TAVNQQLDSG GKGYSDLSSP TEPLPFSFEG MIRGRRHGGG VEKVVERRQR RMIKNRESAA
301: RSRARKQAYT MELEAEVQKL KELNQELERK QAEIMEMQKN ETPEMLKDPF GRKKRLCLRR TLTGPW
101: RQGSSLTLPR TLSAKTVDEV WRNLVRDEPP QAQVADGGGH HQQHRQSTLG EMTLEEFLVR AGVVRENPAP APPAPQPLTM MPPRPVPVAP KSSAFFGNLP
201: GADDAAAAAA LGFAPVGMGD LALIPPRAAA GMGGSAMAVQ TAVNQQLDSG GKGYSDLSSP TEPLPFSFEG MIRGRRHGGG VEKVVERRQR RMIKNRESAA
301: RSRARKQAYT MELEAEVQKL KELNQELERK QAEIMEMQKN ETPEMLKDPF GRKKRLCLRR TLTGPW
001: MGTHINFNNL GGGGHPGGEG SSNQMKPTGS VMPLARQSSV YSLTFDELQN TLGGPGKDFG SMNMDELLKS IWTAEEAQAM AMTSAPAATA VAQPGAGIPP
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
101: PGGNLQRQGS LTLPRTISQK TVDEVWKCLI TKDGNMEGSS GGGGESNVPP GRQQTLGEMT LEEFLFRAGV VREDNCVQQM GQVNGNNNNG FYGNSTAAGG
201: LGFGFGQPNQ NSITFNGTND SMILNQPPGL GLKMGGTMQQ QQQQQQLLQQ QQQQMQQLNQ PHPQQRLPQT IFPKQANVAF SAPVNITNKG FAGAANNSIN
301: NNNGLASYGG TGVTVAATSP GTSSAENNSL SPVPYVLNRG RRSNTGLEKV IERRQRRMIK NRESAARSRA RKQAYTLELE AEIEKLKKTN QELQKKQAEM
401: VEMQKNELKE TSKRPWGSKR QCLRRTLTGP W
Arabidopsis Description
ABF4ABRE binding factor 4 [Source:UniProtKB/TrEMBL;Acc:F4JB53]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.