Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P30550_001 | Banana | nucleus | 71.65 | 69.85 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 63.66 | 64.49 |
| CDY65560 | Canola | nucleus | 45.88 | 58.94 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 60.57 | 58.31 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 57.73 | 55.04 |
| CDY17109 | Canola | nucleus | 45.62 | 52.84 |
| Bra040260.1-P | Field mustard | nucleus | 49.23 | 52.47 |
| Os06t0211200-01 | Rice | nucleus | 43.04 | 51.54 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 53.35 | 51.36 |
| Os08t0472000-01 | Rice | nucleus | 41.49 | 50.63 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 43.3 | 50.45 |
| KRH61298 | Soybean | nucleus | 53.61 | 49.88 |
| EES07580 | Sorghum | nucleus | 44.07 | 49.42 |
| TraesCS7B01G075600.1 | Wheat | nucleus | 43.3 | 49.41 |
| OQU80633 | Sorghum | nucleus | 48.45 | 49.21 |
| EER96850 | Sorghum | nucleus | 46.39 | 49.18 |
| OQU78764 | Sorghum | nucleus | 39.43 | 49.04 |
| TraesCS7A01G170600.1 | Wheat | nucleus | 43.3 | 48.98 |
| CDY28083 | Canola | nucleus | 29.9 | 48.95 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 43.3 | 48.7 |
| Zm00001d037170_P001 | Maize | nucleus | 42.27 | 48.52 |
| CDY68227 | Canola | nucleus | 43.56 | 48.42 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 55.67 | 48.32 |
| Os02t0766700-01 | Rice | nucleus | 44.33 | 48.18 |
| Zm00001d044940_P002 | Maize | nucleus | 43.56 | 48.15 |
| Zm00001d018178_P001 | Maize | nucleus | 43.56 | 48.15 |
| TraesCS5A01G237200.2 | Wheat | nucleus | 45.62 | 48.1 |
| CDX69020 | Canola | nucleus | 43.3 | 48.0 |
| KXG19586 | Sorghum | nucleus | 43.04 | 47.99 |
| KRH52002 | Soybean | cytosol | 12.11 | 47.96 |
| HORVU6Hr1G080670.1 | Barley | nucleus | 44.07 | 47.9 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 50.26 | 47.68 |
| Solyc04g078840.2.1 | Tomato | nucleus | 54.9 | 47.65 |
| TraesCS6A01G333600.2 | Wheat | nucleus | 42.78 | 47.43 |
| TraesCS5D01G244500.1 | Wheat | nucleus | 44.59 | 47.27 |
| CDY18575 | Canola | nucleus | 42.78 | 47.16 |
| Os09t0456200-01 | Rice | nucleus | 45.62 | 47.07 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 42.53 | 47.01 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 44.07 | 46.72 |
| KRH50289 | Soybean | nucleus | 51.03 | 46.7 |
| CDX99242 | Canola | nucleus | 42.53 | 46.61 |
| PGSC0003DMT400020670 | Potato | nucleus | 54.12 | 46.36 |
| HORVU5Hr1G068230.1 | Barley | nucleus | 43.81 | 46.32 |
| Bra001742.1-P | Field mustard | nucleus | 42.27 | 46.2 |
| CDX82302 | Canola | nucleus | 43.3 | 46.15 |
| Bra022409.1-P | Field mustard | nucleus | 42.01 | 46.05 |
| CDX92320 | Canola | nucleus | 42.01 | 45.92 |
| TraesCS6D01G312800.1 | Wheat | nucleus | 42.53 | 45.83 |
| AT1G45249.6 | Thale cress | nucleus | 50.52 | 45.48 |
| CDY51041 | Canola | nucleus | 38.66 | 45.45 |
| PGSC0003DMT400059040 | Potato | nucleus | 42.78 | 45.36 |
| KRH52003 | Soybean | nucleus | 38.4 | 45.29 |
| CDY63041 | Canola | nucleus | 40.98 | 44.92 |
| KRH71134 | Soybean | nucleus | 50.26 | 44.42 |
| Solyc10g050210.1.1 | Tomato | nucleus | 44.33 | 44.33 |
| CDY58256 | Canola | nucleus | 44.59 | 44.25 |
| Bra037533.1-P | Field mustard | nucleus | 44.07 | 44.07 |
| Solyc01g108080.2.1 | Tomato | nucleus | 45.88 | 43.0 |
| PGSC0003DMT400015892 | Potato | nucleus | 45.36 | 42.51 |
| KXG26981 | Sorghum | nucleus | 18.04 | 42.42 |
| Bra018800.1-P | Field mustard | nucleus | 40.21 | 42.39 |
| Zm00001d031790_P002 | Maize | nucleus | 38.92 | 42.3 |
| Zm00001d020711_P001 | Maize | nucleus | 43.81 | 41.98 |
| PGSC0003DMT400066603 | Potato | nucleus | 44.59 | 41.79 |
| CDX72445 | Canola | nucleus | 44.07 | 41.71 |
| Solyc11g044560.1.1 | Tomato | nucleus | 42.78 | 41.6 |
| AT3G19290.3 | Thale cress | nucleus | 46.13 | 41.44 |
| Zm00001d050018_P007 | Maize | nucleus | 41.24 | 40.92 |
| GSMUA_Achr8P21560_001 | Banana | nucleus | 25.0 | 40.76 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 20.62 | 39.6 |
| GSMUA_Achr11P... | Banana | nucleus | 24.48 | 39.09 |
| Bra011485.1-P | Field mustard | nucleus | 44.07 | 38.95 |
| Zm00001d005884_P002 | Maize | nucleus | 30.41 | 38.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.32 | 38.69 |
| GSMUA_Achr6P15970_001 | Banana | nucleus | 19.33 | 38.66 |
| AT4G34000.2 | Thale cress | nucleus | 45.1 | 38.55 |
| AT1G49720.2 | Thale cress | nucleus | 39.18 | 37.72 |
| GSMUA_Achr2P20490_001 | Banana | nucleus | 23.45 | 37.45 |
| GSMUA_Achr8P07740_001 | Banana | nucleus | 32.73 | 36.6 |
| GSMUA_Achr10P... | Banana | nucleus | 21.91 | 36.32 |
| GSMUA_Achr2P07520_001 | Banana | nucleus | 20.1 | 35.78 |
| GSMUA_Achr3P22710_001 | Banana | nucleus | 31.96 | 35.33 |
| GSMUA_Achr3P22470_001 | Banana | nucleus | 21.39 | 32.42 |
| AT5G42910.1 | Thale cress | nucleus | 30.15 | 31.62 |
| Bra017621.1-P | Field mustard | cytosol | 23.97 | 31.21 |
| GSMUA_Achr9P08900_001 | Banana | nucleus | 19.33 | 30.24 |
| CDX71528 | Canola | nucleus | 30.41 | 30.18 |
| CDY22378 | Canola | nucleus | 30.67 | 30.13 |
| GSMUA_Achr10P... | Banana | nucleus | 20.1 | 29.21 |
| Bra033649.1-P | Field mustard | nucleus | 30.67 | 28.74 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr5G24570_001 | EnsemblPlants:GSMUA_Achr5P24570_001 | EnsemblPlants:GSMUA_Achr5T24570_001 | InterPro:IPR004827 |
| UniProt:M0T1D2 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF368 |
| SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000296EDF1 | InterPro:bZIP | SEG:seg | : |
Description
Putative bZIP transcription factor TRAB1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24570_001]
Coordinates
chr5:+:25886700..25892760
Molecular Weight (calculated)
40951.7 Da
IEP (calculated)
9.516
GRAVY (calculated)
-0.455
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGADGETP LARQGSIYSL TFDEFQSTLG GLGKDLGSMN VDELLKNIWN AEESYAIAAT LGEGGGGAGG APGLQRQGSL TLPRTLSHKT VDEVWRGFVD
101: ASSSGQGPVV GGSSYVMRQP TLGEMTLEEF LVRAGVAREE LTPPPVHPRP ADTKINTTSV FFGDLPTVSS STGLSVGFNR ANQSNGNVAN APVPHSSAAN
201: FGMTVTAARS YAAPMPLETG VDMGNPQGMR GGGLVSFGDA GMDNQLMKGM VGLGTAGVVT AKGSPATHLS PDVLGKANGD LSSVSPAPYT VNSGMRGRKH
301: SGAVEKVIER RQKRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL QKKQAEMLEM EKNQALQMIS QQNGPKKQCL RRTQTGPW
101: ASSSGQGPVV GGSSYVMRQP TLGEMTLEEF LVRAGVAREE LTPPPVHPRP ADTKINTTSV FFGDLPTVSS STGLSVGFNR ANQSNGNVAN APVPHSSAAN
201: FGMTVTAARS YAAPMPLETG VDMGNPQGMR GGGLVSFGDA GMDNQLMKGM VGLGTAGVVT AKGSPATHLS PDVLGKANGD LSSVSPAPYT VNSGMRGRKH
301: SGAVEKVIER RQKRMIKNRE SAARSRARKQ AYTMELEAEV AKLKEQNQEL QKKQAEMLEM EKNQALQMIS QQNGPKKQCL RRTQTGPW
001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW
Arabidopsis Description
ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.