CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78764	Sorghum	nucleus	66.06	34.94
Os08t0472000-01	Rice	nucleus	62.42	32.39
OQU80633	Sorghum	nucleus	69.7	30.1
Zm00001d031790_P002	Maize	nucleus	55.15	25.49
Zm00001d050018_P007	Maize	nucleus	58.18	24.55
KRH52003	Soybean	nucleus	46.67	23.4
CDY65560	Canola	nucleus	41.82	22.85
EER96850	Sorghum	nucleus	50.3	22.68
CDY17109	Canola	nucleus	43.03	21.19
CDY28083	Canola	nucleus	28.48	19.83
KXG19586	Sorghum	nucleus	41.82	19.83
EES07580	Sorghum	nucleus	41.21	19.65
Bra040260.1-P	Field mustard	nucleus	41.82	18.96
CDX69020	Canola	nucleus	40.0	18.86
CDY68227	Canola	nucleus	38.79	18.34
GSMUA_Achr5P24570_001	Banana	nucleus	42.42	18.04
KRH61298	Soybean	nucleus	45.45	17.99
GSMUA_Achr5P05690_001	Banana	nucleus	44.24	17.94
GSMUA_Achr6P30550_001	Banana	nucleus	43.03	17.84
GSMUA_Achr6P04270_001	Banana	nucleus	41.21	17.75
VIT_03s0063g00310.t01	Wine grape	nucleus	43.64	17.6
CDY18575	Canola	nucleus	36.97	17.33
Solyc04g078840.2.1	Tomato	nucleus	46.06	17.0
CDX99242	Canola	nucleus	36.36	16.95
Bra001742.1-P	Field mustard	nucleus	36.36	16.9
CDY51041	Canola	nucleus	33.33	16.67
CDY63041	Canola	nucleus	35.76	16.67
Bra022409.1-P	Field mustard	nucleus	35.76	16.67
GSMUA_Achr9P27130_001	Banana	nucleus	40.61	16.63
CDX92320	Canola	nucleus	35.76	16.62
PGSC0003DMT400020670	Potato	nucleus	45.45	16.56
AT1G45249.6	Thale cress	nucleus	43.03	16.47
Solyc01g108080.2.1	Tomato	nucleus	41.21	16.43
VIT_18s0001g10450.t01	Wine grape	nucleus	44.24	16.33
CDX82302	Canola	nucleus	35.76	16.21
KXG39483	Sorghum	nucleus	23.64	15.98
PGSC0003DMT400066603	Potato	nucleus	40.0	15.94
GSMUA_Achr3P07000_001	Banana	nucleus	38.79	15.88
PGSC0003DMT400059040	Potato	nucleus	35.15	15.85
OQU90534	Sorghum	nucleus	30.3	15.72
Bra037533.1-P	Field mustard	nucleus	36.97	15.72
Solyc10g050210.1.1	Tomato	nucleus	36.97	15.72
CDY58256	Canola	nucleus	36.97	15.6
CDX72445	Canola	nucleus	38.18	15.37
PGSC0003DMT400015892	Potato	nucleus	37.58	14.98
Bra018800.1-P	Field mustard	nucleus	33.33	14.95
Solyc11g044560.1.1	Tomato	nucleus	35.15	14.54
AT1G49720.2	Thale cress	nucleus	35.15	14.39
KRH50289	Soybean	nucleus	36.97	14.39
Bra011485.1-P	Field mustard	nucleus	38.18	14.35
EES18296	Sorghum	nucleus, plastid	23.03	14.23
KRH71134	Soybean	nucleus	37.58	14.12
AT3G19290.3	Thale cress	nucleus	36.97	14.12
AT4G34000.2	Thale cress	nucleus	38.79	14.1
EES18419	Sorghum	nucleus	27.27	13.89
AT5G42910.1	Thale cress	nucleus	30.91	13.78
CDY22378	Canola	nucleus	32.73	13.67
EES03943	Sorghum	nucleus	21.21	13.36
CDX71528	Canola	nucleus	30.91	13.04
Bra033649.1-P	Field mustard	nucleus	32.73	13.04
EES03785	Sorghum	nucleus	26.06	12.91
KXG33733	Sorghum	nucleus	29.7	11.92
Bra017621.1-P	Field mustard	cytosol	0.61	0.34
KRH52002	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1B6PMT3	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	EnsemblPlants:KXG26981	ProteinID:KXG26981	ProteinID:KXG26981.1	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF368	SMART:SM00338	EnsemblPlantsGene:SORBI_3006G190800	SUPFAM:SSF57959
UniParc:UPI00081AD0A1	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54515866..54518451

Molecular Weight (calculated)

18328.3 Da

IEP (calculated)

10.365

GRAVY (calculated)

-0.442

Length

165 amino acids

Sequence
(BLAST)

001: MAMGNGLMPG VPGMAGGAVT VVSPVDTSVA QLDSMGKGNG DLSSPMAPVP YPFEGVIRGR RSGACVEKVV ERRQRRMIKN RESAARSRAR KQAYTMELEA
101: EVQKLKEQNE ELQKKHVYTN NAIDNYKQLV LANYQRQILN LSLFLVPSLS MTMRKITTVN ESERL

Best Arabidopsis Sequence Match ( AT1G45249.1 )
(BLAST)

001: MDGSMNLGNE PPGDGGGGGG LTRQGSIYSL TFDEFQSSVG KDFGSMNMDE LLKNIWSAEE TQAMASGVVP VLGGGQEGLQ LQRQGSLTLP RTLSQKTVDQ
101: VWKDLSKVGS SGVGGSNLSQ VAQAQSQSQS QRQQTLGEVT LEEFLVRAGV VREEAQVAAR AQIAENNKGG YFGNDANTGF SVEFQQPSPR VVAAGVMGNL
201: GAETANSLQV QGSSLPLNVN GARTTYQQSQ QQQPIMPKQP GFGYGTQMGQ LNSPGIRGGG LVGLGDQSLT NNVGFVQGAS AAIPGALGVG AVSPVTPLSS
301: EGIGKSNGDS SSLSPSPYMF NGGVRGRKSG TVEKVVERRQ RRMIKNRESA ARSRARKQAY TVELEAEVAK LKEENDELQR KQARIMEMQK NQETEMRNLL
401: QGGPKKKLRR TESGPW

Arabidopsis Description

ABF2abscisic acid responsive elements-binding factor 2 [Source:TAIR;Acc:AT1G45249]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.