Factsheet for Bra011485.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68227	Canola	nucleus	75.17	94.56
CDX69020	Canola	nucleus	73.35	92.0
Bra017621.1-P	Field mustard	cytosol	50.34	74.16
AT4G34000.2	Thale cress	nucleus	74.26	71.81
Bra022409.1-P	Field mustard	nucleus	40.55	50.28
Bra040260.1-P	Field mustard	nucleus	40.55	48.9
VIT_03s0063g00310.t01	Wine grape	nucleus	44.42	47.68
Bra001742.1-P	Field mustard	nucleus	38.5	47.61
Os06t0211200-01	Rice	nucleus	34.17	46.3
Bra037533.1-P	Field mustard	nucleus	40.32	45.62
TraesCS6B01G364000.1	Wheat	nucleus	36.45	45.58
TraesCS6A01G333600.2	Wheat	nucleus	36.22	45.43
OQU78764	Sorghum	nucleus	31.89	44.87
Os02t0766700-01	Rice	nucleus	36.45	44.82
PGSC0003DMT400059040	Potato	nucleus	37.36	44.81
HORVU7Hr1G035500.2	Barley	nucleus	33.94	44.74
HORVU6Hr1G080670.1	Barley	nucleus	36.22	44.54
EES07580	Sorghum	nucleus	35.08	44.51
TraesCS6D01G312800.1	Wheat	nucleus	36.45	44.44
Zm00001d037170_P001	Maize	nucleus	34.17	44.38
GSMUA_Achr5P24570_001	Banana	nucleus	38.95	44.07
Solyc01g108080.2.1	Tomato	nucleus	41.46	43.96
TraesCS7B01G075600.1	Wheat	nucleus	33.94	43.82
Bra018800.1-P	Field mustard	nucleus	36.45	43.48
Zm00001d044940_P002	Maize	nucleus	34.62	43.3
GSMUA_Achr6P04270_001	Banana	nucleus	37.59	43.08
Zm00001d018178_P001	Maize	nucleus	34.4	43.02
PGSC0003DMT400066603	Potato	nucleus	40.55	43.0
GSMUA_Achr6P30550_001	Banana	nucleus	38.95	42.96
TraesCS7D01G171300.1	Wheat	nucleus	33.71	42.9
TraesCS7A01G170600.1	Wheat	nucleus	33.49	42.86
GSMUA_Achr9P27130_001	Banana	nucleus	39.18	42.68
OQU80633	Sorghum	nucleus	37.13	42.67
KXG19586	Sorghum	nucleus	33.71	42.53
Os08t0472000-01	Rice	nucleus	30.75	42.45
KRH50289	Soybean	nucleus	41.0	42.45
Solyc10g050210.1.1	Tomato	nucleus	36.45	41.24
GSMUA_Achr5P05690_001	Banana	nucleus	37.81	40.79
TraesCS5B01G235600.2	Wheat	nucleus	33.94	40.71
TraesCS5A01G237200.2	Wheat	nucleus	33.94	40.49
TraesCS5D01G244500.1	Wheat	nucleus	33.71	40.44
EER96850	Sorghum	nucleus	33.71	40.44
PGSC0003DMT400015892	Potato	nucleus	38.04	40.34
Os09t0456200-01	Rice	nucleus	34.4	40.16
Solyc11g044560.1.1	Tomato	nucleus	36.45	40.1
KRH71134	Soybean	nucleus	40.09	40.09
HORVU5Hr1G068230.1	Barley	nucleus	33.49	40.05
KXG26981	Sorghum	nucleus	14.35	38.18
Zm00001d031790_P002	Maize	nucleus	30.75	37.82
GSMUA_Achr3P07000_001	Banana	nucleus	33.03	35.98
Bra007276.1-P	Field mustard	nucleus	23.01	35.82
Bra014668.1-P	Field mustard	nucleus	18.68	35.81
Zm00001d020711_P001	Maize	nucleus	33.03	35.8
Bra007274.1-P	Field mustard	nucleus	22.78	35.46
Bra016953.1-P	Field mustard	nucleus	21.41	35.21
Zm00001d050018_P007	Maize	nucleus	31.21	35.04
Bra004597.1-P	Field mustard	nucleus	21.18	33.1
Zm00001d005884_P002	Maize	nucleus	21.87	31.48
Bra017251.1-P	Field mustard	nucleus	27.79	30.81
Bra019436.1-P	Field mustard	nucleus	23.01	30.06
Bra005287.1-P	Field mustard	nucleus	28.02	28.08
Bra033649.1-P	Field mustard	nucleus	25.06	26.57
Bra003253.1-P	Field mustard	plastid	22.1	24.07
Bra015281.1-P	Field mustard	nucleus, plastid	14.35	23.51
Bra033719.1-P	Field mustard	nucleus, plastid	12.98	21.43

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra011485	EnsemblPlants:Bra011485.1	EnsemblPlants:Bra011485.1-P	ncoils:Coil
GO:GO:0000976	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009737	GO:GO:0009738	GO:GO:0009987	GO:GO:0043565	InterPro:IPR004827	UniProt:M4D4T0
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF158	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0002545AB2	InterPro:bZIP	SEG:seg	:	:

Description

AT4G34000 (E=1e-063) ABF3, DPBF5 | ABF3 (ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3); DNA binding / protein binding / transcription activator/ transcription factor

Coordinates

chrA01:-:1988050..1990025

Molecular Weight (calculated)

48109.2 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.568

Length

439 amino acids

Sequence
(BLAST)

001: MGSQFNFVDD AKQPALGAGV PLTRQNSVFS LTFDEFQNSW GGGVGKDFGS MNMDELLKNI WTAEESHSIM ANNTSFNNTF NGGLSVGVGG EIGVGGGLQR
101: QGSITLPRTI SQKRVDDVWK ELMKDDDAGS GGGGASGVPQ RQQTLGEMTL EEFLVRAGVV REEPQQVERV DSFNGGFFGF GSDAGLGSAR NGFGPNLVRP
201: DLLTTQTQPL QMQPQQPQKV HQPQQLIQKQ QDVAFPKQST IAFSNTVDLV NRSQPPTQEV KPSVLGVRDR PMNNNNLLQA VDFKTGVTVA AVSPGSQMSP
301: ELTPKSNMDA SLSPVPYMFG RVRKTGAVLE KVIERRQKRM IKNRESAARS RARKQAYTLE LEAEVAQLKE QNEELQRKQV EIIEKQKKQL NTVTYIVSSG
401: ADASAMGMQK AMLEKDTDRS LVESLLMKAS KELNKEQKL

Best Arabidopsis Sequence Match ( AT4G34000.2 )
(BLAST)

001: MGSRLNFKSF VDGVSEQQPT VGTSLPLTRQ NSVFSLTFDE FQNSWGGGIG KDFGSMNMDE LLKNIWTAEE SHSMMGNNTS YTNISNGNSG NTVINGGGNN
101: IGGLAVGVGG ESGGFFTGGS LQRQGSLTLP RTISQKRVDD VWKELMKEDD IGNGVVNGGT SGIPQRQQTL GEMTLEEFLV RAGVVREEPQ PVESVTNFNG
201: GFYGFGSNGG LGTASNGFVA NQPQDLSGNG VAVRQDLLTA QTQPLQMQQP QMVQQPQMVQ QPQQLIQTQE RPFPKQTTIA FSNTVDVVNR SQPATQCQEV
301: KPSILGIHNH PMNNNLLQAV DFKTGVTVAA VSPGSQMSPD LTPKSALDAS LSPVPYMFGR VRKTGAVLEK VIERRQKRMI KNRESAARSR ARKQAYTMEL
401: EAEIAQLKEL NEELQKKQVE IMEKQKNQLL EPLRQPWGMG CKRQCLRRTL TGPW

Arabidopsis Description

ABF3ABSCISIC ACID-INSENSITIVE 5-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M7Q3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.