Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
27899926
|
gfp PMID:
27899926
doi
Beijing Municipal Key Laboratory of Molecular Genetics of Hybrid Wheat, Beijing Engineering Research Center for Hybrid Wheat, Beijing Academy of Agriculture and Forestry Sciences Beijing, China., Beijing Municipal Key Laboratory of Molecular Genetics of Hybrid Wheat, Beijing Engineering Research Center for Hybrid Wheat, Beijing Academy of Agriculture and Forestry SciencesBeijing, China; College of Agriculture, Shanxi Agricultural UniversityTaigu, China., College of Agronomy, Northwest A & F University Yangling, China., College of Agronomy, Northwest A & F UniversityYangling, China; Beijing Municipal Key Laboratory of Molecular Genetics of Hybrid Wheat, Beijing Engineering Research Center for Hybrid Wheat, Beijing Academy of Agriculture and Forestry SciencesBeijing, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G170600.1 | Wheat | nucleus | 97.94 | 97.08 |
| HORVU7Hr1G035500.2 | Barley | nucleus | 94.71 | 96.7 |
| TraesCS7D01G171300.1 | Wheat | nucleus | 97.94 | 96.52 |
| Os06t0211200-01 | Rice | nucleus | 72.94 | 76.54 |
| KXG19586 | Sorghum | nucleus | 77.06 | 75.29 |
| Zm00001d037170_P001 | Maize | nucleus | 73.24 | 73.67 |
| Zm00001d044940_P002 | Maize | nucleus | 74.41 | 72.08 |
| TraesCS6B01G364000.1 | Wheat | nucleus | 60.88 | 58.97 |
| CDY65560 | Canola | nucleus | 46.47 | 52.32 |
| KRH52002 | Soybean | cytosol | 14.12 | 48.98 |
| CDY28083 | Canola | nucleus | 33.82 | 48.52 |
| CDY17109 | Canola | nucleus | 46.76 | 47.46 |
| GSMUA_Achr6P30550_001 | Banana | nucleus | 53.24 | 45.48 |
| CDY68227 | Canola | nucleus | 46.47 | 45.27 |
| Bra040260.1-P | Field mustard | nucleus | 48.24 | 45.05 |
| CDX99242 | Canola | nucleus | 46.76 | 44.92 |
| CDY18575 | Canola | nucleus | 46.47 | 44.89 |
| CDX69020 | Canola | nucleus | 46.18 | 44.86 |
| CDY51041 | Canola | nucleus | 42.94 | 44.24 |
| GSMUA_Achr5P05690_001 | Banana | nucleus | 52.06 | 43.49 |
| GSMUA_Achr5P24570_001 | Banana | nucleus | 49.41 | 43.3 |
| Bra022409.1-P | Field mustard | nucleus | 45.0 | 43.22 |
| TraesCS5B01G235600.2 | Wheat | nucleus | 46.47 | 43.17 |
| CDX92320 | Canola | nucleus | 45.0 | 43.1 |
| CDY63041 | Canola | nucleus | 44.12 | 42.37 |
| CDX82302 | Canola | nucleus | 45.0 | 42.03 |
| Bra001742.1-P | Field mustard | nucleus | 43.82 | 41.97 |
| KRH61298 | Soybean | nucleus | 50.29 | 41.01 |
| Bra037533.1-P | Field mustard | nucleus | 46.76 | 40.98 |
| GSMUA_Achr6P04270_001 | Banana | nucleus | 45.59 | 40.47 |
| PGSC0003DMT400059040 | Potato | nucleus | 43.53 | 40.44 |
| Bra018800.1-P | Field mustard | nucleus | 43.53 | 40.22 |
| GSMUA_Achr3P07000_001 | Banana | nucleus | 47.35 | 39.95 |
| GSMUA_Achr9P27130_001 | Banana | nucleus | 47.35 | 39.95 |
| VIT_03s0063g00310.t01 | Wine grape | nucleus | 47.65 | 39.61 |
| Solyc01g108080.2.1 | Tomato | nucleus | 47.94 | 39.37 |
| Solyc10g050210.1.1 | Tomato | nucleus | 44.71 | 39.18 |
| Solyc04g078840.2.1 | Tomato | nucleus | 51.47 | 39.15 |
| CDY58256 | Canola | nucleus | 45.0 | 39.13 |
| AT1G45249.6 | Thale cress | nucleus | 49.41 | 38.98 |
| VIT_18s0001g10450.t01 | Wine grape | nucleus | 51.18 | 38.93 |
| PGSC0003DMT400020670 | Potato | nucleus | 50.88 | 38.19 |
| CDX72445 | Canola | nucleus | 45.88 | 38.05 |
| PGSC0003DMT400066603 | Potato | nucleus | 45.88 | 37.68 |
| AT3G19290.3 | Thale cress | nucleus | 47.35 | 37.27 |
| KRH50289 | Soybean | nucleus | 46.18 | 37.03 |
| Solyc11g044560.1.1 | Tomato | nucleus | 43.24 | 36.84 |
| PGSC0003DMT400015892 | Potato | nucleus | 44.71 | 36.72 |
| TraesCS4B01G175800.1 | Wheat | nucleus | 23.53 | 35.56 |
| KRH71134 | Soybean | nucleus | 45.88 | 35.54 |
| AT4G34000.2 | Thale cress | nucleus | 46.47 | 34.8 |
| AT1G49720.2 | Thale cress | nucleus | 41.18 | 34.74 |
| KRH52003 | Soybean | nucleus | 33.24 | 34.35 |
| Bra011485.1-P | Field mustard | nucleus | 43.82 | 33.94 |
| TraesCS2B01G115700.1 | Wheat | nucleus | 27.06 | 33.58 |
| TraesCS1B01G317100.1 | Wheat | nucleus | 31.18 | 32.92 |
| TraesCS3B01G368300.1 | Wheat | nucleus | 31.76 | 31.49 |
| AT5G42910.1 | Thale cress | nucleus | 33.24 | 30.54 |
| TraesCS3B01G404600.1 | Wheat | nucleus | 34.41 | 30.23 |
| TraesCS3B01G411300.1 | Wheat | nucleus | 22.06 | 30.0 |
| TraesCS5B01G139800.1 | Wheat | nucleus | 27.06 | 29.39 |
| TraesCS1B01G282800.1 | Wheat | nucleus | 21.76 | 29.37 |
| TraesCS3B01G404500.1 | Wheat | nucleus | 33.53 | 29.16 |
| TraesCS3B01G404200.1 | Wheat | nucleus | 33.24 | 28.97 |
| TraesCS3B01G404300.1 | Wheat | nucleus | 33.24 | 28.9 |
| TraesCS3B01G404400.1 | Wheat | nucleus | 32.94 | 28.64 |
| Bra017621.1-P | Field mustard | cytosol | 24.71 | 28.19 |
| CDX71528 | Canola | nucleus | 32.35 | 28.13 |
| CDY22378 | Canola | nucleus | 32.35 | 27.85 |
| Bra033649.1-P | Field mustard | nucleus | 32.65 | 26.81 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009414 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 |
| GO:GO:0009789 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR004827 | PFAM:PF00170 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF350 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS7B01G075600 |
| EnsemblPlants:TraesCS7B01G075600.1 | InterPro:bZIP | TIGR:cd14707 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7B:+:85127983..85133561
Molecular Weight (calculated)
36780.3 Da
IEP (calculated)
9.128
GRAVY (calculated)
-0.423
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMPGGSGGA GALARQGSIY SLTFDEFQSA LGGAGKDFGS MNMDELLRNI WTAEESNAIA ATLTPATTAV PTSNVDAQPP PPPPLQPQQQ AILRQGSMTL
101: PRTLSQMTVD EVWRDIMGFC DEEPPAPPAP APAQAQAEAQ AQRQQTLGRM TLEEFLVRAG VVREDMGGQT VVVPARAQAL FPQGNVVAPT MQVANGVVHG
201: VVGQGPGVAM TVAAPTTPGV LNGFGKMEGG DLSSLSPVPY PFDTVTRARK GPTVEKVVER RQRRMIKNRE SAARSRQRKQ AYIMELEAEV AKLKENNEAL
301: QKKQVEMLQK QKDEVIERIE KQLGPKAKRF CLRRTLTGPW
101: PRTLSQMTVD EVWRDIMGFC DEEPPAPPAP APAQAQAEAQ AQRQQTLGRM TLEEFLVRAG VVREDMGGQT VVVPARAQAL FPQGNVVAPT MQVANGVVHG
201: VVGQGPGVAM TVAAPTTPGV LNGFGKMEGG DLSSLSPVPY PFDTVTRARK GPTVEKVVER RQRRMIKNRE SAARSRQRKQ AYIMELEAEV AKLKENNEAL
301: QKKQVEMLQK QKDEVIERIE KQLGPKAKRF CLRRTLTGPW
001: MDSQRGIVEQ AKSQSLNRQS SLYSLTLDEV QNHLGSSGKA LGSMNLDELL KSVCSVEANQ PSSMAVNGGA AAQEGLSRQG SLTLPRDLSK KTVDEVWKDI
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
101: QQNKNGGSAH ERRDKQPTLG EMTLEDLLLK AGVVTETIPG SNHDGPVGGG SAGSGAGLGQ NITQVGPWIQ YHQLPSMPQP QAFMPYPVSD MQAMVSQSSL
201: MGGLSDTQTP GRKRVASGEV VEKTVERRQK RMIKNRESAA RSRARKQAYT HELEIKVSRL EEENERLRKQ KEVEKILPSV PPPDPKRQLR RTSSAPF
Arabidopsis Description
DPBF3ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LES3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.