Factsheet for TraesCS4B01G175800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G128900.1	Wheat	nucleus	98.22	98.22
TraesCS4D01G177700.1	Wheat	nucleus	96.89	97.76
VIT_04s0069g01150.t01	Wine grape	nucleus	18.67	73.68
KXG39483	Sorghum	nucleus	64.44	59.43
Os03t0322700-00	Rice	nucleus	62.22	57.38
TraesCS2B01G115700.1	Wheat	nucleus	61.33	50.37
VIT_12s0034g00110.t01	Wine grape	nucleus	19.11	43.43
GSMUA_Achr8P21560_001	Banana	nucleus	45.78	43.28
GSMUA_Achr6P15970_001	Banana	nucleus	36.89	42.78
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	32.89	36.63
GSMUA_Achr10P...	Banana	nucleus	36.89	35.47
VIT_13s0175g00120.t01	Wine grape	nucleus	51.11	35.38
KRH13203	Soybean	nucleus	46.67	34.77
TraesCS1B01G317100.1	Wheat	nucleus	48.89	34.16
TraesCS3B01G368300.1	Wheat	nucleus	51.56	33.82
KRH56272	Soybean	nucleus	47.11	33.54
KRH44714	Soybean	nucleus	48.0	33.44
KRH62689	Soybean	nucleus	46.22	32.91
TraesCS3B01G411300.1	Wheat	nucleus	32.89	29.6
TraesCS5B01G139800.1	Wheat	nucleus	40.89	29.39
TraesCS1B01G282800.1	Wheat	nucleus	31.56	28.17
Solyc01g009510.1.1	Tomato	nucleus	21.33	25.26
TraesCS7B01G075600.1	Wheat	nucleus	35.56	23.53
TraesCS6B01G364000.1	Wheat	nucleus	32.44	20.8
TraesCS5B01G235600.2	Wheat	nucleus	33.33	20.49
TraesCS3B01G404600.1	Wheat	nucleus	34.22	19.9
TraesCS3B01G404300.1	Wheat	nucleus	34.22	19.69
TraesCS3B01G404200.1	Wheat	nucleus	33.33	19.23
TraesCS3B01G404500.1	Wheat	nucleus	31.56	18.16
TraesCS3B01G404400.1	Wheat	nucleus	31.56	18.16

Protein Annotations

EnsemblPlants:TraesCS4B01G175800.1	EnsemblPlantsGene:TraesCS4B01G175800	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR22952	PANTHER:PTHR22952:SF234	PFAM:PF00170	PFscan:PS50217
ScanProsite:PS00036	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14707	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr4B:+:386202498..386205002

Molecular Weight (calculated)

24642.9 Da

IEP (calculated)

10.185

GRAVY (calculated)

-0.920

Length

225 amino acids

Sequence
(BLAST)

001: MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDNLLR TAGSARRTAD EVWRDIHGAD GGTSRPRAQM TLEDFLSRPG GDAGGAHWAE QYNPPAPVPG
101: QQRHNNVGRP LPRPLGVGAG PVLDALYHDH DHDGATMSGQ KRAAVGGPGE KTVERRKKRM IKNRESAARS RARKQAYTNE LENKISRLEE ENEQLRSYKA
201: FEPVVHCVPQ QEPKNQLRRR NSASF

Best Arabidopsis Sequence Match ( AT2G41070.1 )
(BLAST)

001: MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH
101: KQPTLGEITL EDLLLRAGVV TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAPGRKR VAGEIVEKTV ERRQKRMIKN
201: RESAARSRAR KQAYTHELEI KVSRLEEENE KLRRLKEVEK ILPSEPPPDP KWKLRRTNSA SL

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.