Factsheet for TraesCS4D01G177700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G175800.1	Wheat	nucleus	97.76	96.89
TraesCS4A01G128900.1	Wheat	nucleus	97.76	96.89
VIT_04s0069g01150.t01	Wine grape	nucleus	18.83	73.68
KXG39483	Sorghum	nucleus	64.57	59.02
Os03t0322700-00	Rice	nucleus	62.78	57.38
TraesCS2D01G098700.1	Wheat	nucleus	62.78	51.47
VIT_12s0034g00110.t01	Wine grape	nucleus	19.28	43.43
GSMUA_Achr6P15970_001	Banana	nucleus	37.67	43.3
GSMUA_Achr8P21560_001	Banana	nucleus	45.74	42.86
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	34.08	37.62
GSMUA_Achr10P...	Banana	nucleus	38.12	36.32
VIT_13s0175g00120.t01	Wine grape	nucleus	51.57	35.38
KRH13203	Soybean	nucleus	47.53	35.1
TraesCS1D01G306000.1	Wheat	nucleus	50.22	34.25
TraesCS3D01G330300.1	Wheat	nucleus	51.57	34.12
KRH56272	Soybean	nucleus	47.98	33.86
KRH44714	Soybean	nucleus	48.88	33.75
KRH62689	Soybean	nucleus	47.09	33.23
TraesCS3D01G371900.1	Wheat	nucleus	33.18	29.6
TraesCS1D01G273100.1	Wheat	nucleus	32.74	28.97
TraesCS5D01G150700.1	Wheat	nucleus	36.77	25.95
Solyc01g009510.1.1	Tomato	nucleus	21.97	25.79
TraesCS7D01G171300.1	Wheat	nucleus	36.32	23.48
TraesCS5D01G244500.1	Wheat	nucleus	34.08	20.77
TraesCS6D01G312800.1	Wheat	nucleus	33.18	20.56
TraesCS3D01G364900.1	Wheat	nucleus	35.43	20.26
TraesCS3D01G365000.1	Wheat	nucleus	34.08	19.19
TraesCS3D01G365500.1	Wheat	nucleus	30.94	18.02

Protein Annotations

EnsemblPlants:TraesCS4D01G177700.1	EnsemblPlantsGene:TraesCS4D01G177700	Gene3D:1.20.5.170	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR22952	PANTHER:PTHR22952:SF234	PFAM:PF00170	PFscan:PS50217
ScanProsite:PS00036	SMART:SM00338	SUPFAM:SSF57959	TIGR:cd14707	MapMan:15.5.4.1	:

Description

No Description!

Coordinates

chr4D:+:309499727..309501775

Molecular Weight (calculated)

24519.8 Da

IEP (calculated)

10.487

GRAVY (calculated)

-0.919

Length

223 amino acids

Sequence
(BLAST)

001: MGTQAMPSGG AISRQGSLCS LTLSDVEGQL HGVNLDDLLR TAGSARRTAD EVWRDIHGAD GGTSRPRAQM TLEDFLSRPG GDAGGAHWAE QYNPPAPVPR
101: QQRHNNVGRP LQRPLGVGAG PVLDALYHDH DGAAMSGRKR AAVGGPGEKT VERRKKRMIK NRESAARSRA RKQAYTNELE NKISRLEEEN EQLRSYKAFE
201: PVVHCVPQQE PKNQLRRRNS ASF

Best Arabidopsis Sequence Match ( AT2G41070.4 )
(BLAST)

001: MSSQLKATYM GSIRGNIEEP ISQSLTRQNS LYSLKLHEVQ THLGSSGKPL GSMNLDELLK TVLPPAEEGL VRQGSLTLPR DLSKKTVDEV WRDIQQDKNG
101: NGTSTTTTHK QPTLGEITLE DLLLRAGVVT ETVVPQENVV NIASNGQWVE YHHQPQQQQG FMTYPVCEMQ DMVMMGGLSD TPQAPGRKRV AGEIVEKTVE
201: RRQKRMIKNR ESAARSRARK QAYTHELEIK VSRLEEENEK LRRLKEVEKI LPSEPPPDPK WKLRRTNSAS L

Arabidopsis Description

EELBasic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G41070]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.