Factsheet for TraesCS3D01G365000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3B01G594200.1
TraesCS3D01G532000.1
TraesCS4A01G057800.1
TraesCS4A01G058100.1
TraesCS4B01G246800.1
TraesCS4B01G247000.1
TraesCS4D01G246100.2
TraesCS4D01G246400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G44460.1	TraesCS3B01G594200.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT1G13740.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT1G13740.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT1G69260.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT1G69260.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT3G02140.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT3G02140.1	18484180
AT3G44460.1	TraesCS3B01G594200.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS3D01G532000.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4A01G057800.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4A01G058100.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4B01G246800.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4B01G247000.1	AT3G29575.1	18484180
AT3G44460.1	TraesCS4D01G246100.2	AT3G29575.1	18484180
AT3G44460.1	TraesCS4D01G246400.1	AT3G29575.1	18484180

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G364900.1	Wheat	nucleus	84.09	85.38
TraesCS3D01G365500.1	Wheat	nucleus	81.06	83.81
TraesCS3B01G404300.1	Wheat	nucleus	81.57	82.61
TraesCS3A01G371900.3	Wheat	nucleus	79.29	82.2
TraesCS3B01G404500.1	Wheat	nucleus	80.81	81.84
TraesCS3A01G372200.1	Wheat	nucleus	78.54	81.41
TraesCS3B01G404400.1	Wheat	nucleus	80.3	81.33
TraesCS3A01G372000.1	Wheat	nucleus	78.28	80.94
TraesCS3A01G372100.2	Wheat	nucleus	77.78	78.77
HORVU3Hr1G084360.2	Barley	nucleus	74.75	69.98
Os01t0859300-01	Rice	nucleus	51.52	63.16
KXG33733	Sorghum	nucleus	56.82	54.74
Zm00001d012296_P001	Maize	nucleus	56.06	53.88
Zm00001d042779_P001	Maize	nucleus	50.25	51.96
TraesCS4D01G177700.1	Wheat	nucleus	19.19	34.08
CDX75056	Canola	nucleus	33.84	33.58
CDX84141	Canola	nucleus	33.08	33.25
KRG96191	Soybean	nucleus	32.32	33.07
VIT_06s0080g00340.t01	Wine grape	nucleus	27.02	33.02
GSMUA_Achr8P07740_001	Banana	nucleus	28.79	32.85
Bra017251.1-P	Field mustard	nucleus	32.32	32.32
TraesCS7D01G171300.1	Wheat	nucleus	28.03	32.17
CDY43738	Canola	nucleus	32.58	31.93
GSMUA_Achr3P22710_001	Banana	nucleus	28.28	31.91
TraesCS2D01G098700.1	Wheat	nucleus	21.72	31.62
KRH22688	Soybean	nucleus	26.77	31.55
VIT_08s0007g03420.t01	Wine grape	nucleus	31.82	31.5
Bra005287.1-P	Field mustard	nucleus	34.6	31.28
TraesCS1D01G273100.1	Wheat	nucleus	19.7	30.95
AT3G44460.1	Thale cress	nucleus	25.76	30.82
TraesCS1D01G306000.1	Wheat	nucleus	25.25	30.58
AT2G36270.3	Thale cress	nucleus	34.09	30.41
TraesCS6D01G312800.1	Wheat	nucleus	27.53	30.28
TraesCS3D01G330300.1	Wheat	nucleus	25.76	30.27
PGSC0003DMT400006851	Potato	nucleus	32.58	30.14
Solyc09g009490.2.1	Tomato	nucleus	32.32	30.05
CDY10500	Canola	nucleus	25.76	29.48
Bra019436.1-P	Field mustard	nucleus	25.0	29.46
TraesCS5D01G244500.1	Wheat	nucleus	27.02	29.23
TraesCS3D01G371900.1	Wheat	nucleus	18.43	29.2
CDY08701	Canola	nucleus	25.25	28.9
KRH32737	Soybean	nucleus	32.32	28.64
KRH20056	Soybean	nucleus	32.83	26.32
KRH37750	Soybean	nucleus	13.64	25.59
TraesCS5D01G150700.1	Wheat	nucleus	18.43	23.1
KRH26633	Soybean	mitochondrion	25.76	15.84

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF187	SMART:SM00338
SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS3D01G365000	EnsemblPlants:TraesCS3D01G365000.1	InterPro:bZIP	TIGR:cd14707	SEG:seg

Description

No Description!

Coordinates

chr3D:+:479450397..479452087

Molecular Weight (calculated)

42727.1 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.471

Length

396 amino acids

Sequence
(BLAST)

001: MASEMSKDVK FSEEEVTSHP RVLGGEDQTV VPARQSSIFA LTSDELQYSV CEAGRNFGSM NMDEFMSNIW NAKEFQAATS GVLVGMEVDP VVGAGRGGGG
101: EDARGTNLAW QESFSLPPQL CQETVEEVWT EINREPRPVH SRPQSARPSP QIPVQPLAGN GGAVAANDQW GTLGQMTLEQ FLVKIGVVRG SGTGGQATVP
201: VGMVHGQMNL VQQGQQPSPV MYPMAPANGM FHVMGNGMGF VPNGYAGIVV VPPPPPPQGG LGIVSPGSSD GRSAMTQVDM MNSMGDGAMM ENGSARKRAA
301: PEDQSCERSI ERCHHRMIKN RESAGQSRAR KQAYTVELEA ELNHLKEENA HLKAKEKTIL LTKKQMLVEK MMERSKENMN AKKGGALSRR CGSCIW

Best Arabidopsis Sequence Match ( AT2G36270.1 )
(BLAST)

001: MVTRETKLTS EREVESSMAQ ARHNGGGGGE NHPFTSLGRQ SSIYSLTLDE FQHALCENGK NFGSMNMDEF LVSIWNAEEN NNNQQQAAAA AGSHSVPANH
101: NGFNNNNNNG GEGGVGVFSG GSRGNEDANN KRGIANESSL PRQGSLTLPA PLCRKTVDEV WSEIHRGGGS GNGGDSNGRS SSSNGQNNAQ NGGETAARQP
201: TFGEMTLEDF LVKAGVVREH PTNPKPNPNP NQNQNPSSVI PAAAQQQLYG VFQGTGDPSF PGQAMGVGDP SGYAKRTGGG GYQQAPPVQA GVCYGGGVGF
301: GAGGQQMGMV GPLSPVSSDG LGHGQVDNIG GQYGVDMGGL RGRKRVVDGP VEKVVERRQR RMIKNRESAA RSRARKQAYT VELEAELNQL KEENAQLKHA
401: LAELERKRKQ QYFESLKSRA QPKLPKSNGR LRTLMRNPSC PL

Arabidopsis Description

ABI5Basic-leucine zipper (bZIP) transcription factor family protein [Source:TAIR;Acc:AT2G36270]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.